RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 SEMA3GQ9NS98 782 aa6.67□□□□□ -1.34
CLN5-212ENST00000636602 TRAK1Q9UPV9 953 aa6.67□□□□□ -1.34
CLN5-212ENST00000636602 SRFP11831 508 aa6.66□□□□□ -1.34
CLN5-212ENST00000636602 ZNF157P51786 506 aaPredicted RBP6.66□□□□□ -1.34
CLN5-212ENST00000636602 GGNQ86UU5 652 aa6.66□□□□□ -1.34
CLN5-212ENST00000636602 ABHD4Q8TB40 342 aa6.66□□□□□ -1.34
CLN5-212ENST00000636602 CCDC120Q96HB5 630 aa6.66□□□□□ -1.34
CLN5-212ENST00000636602 TTF2Q9UNY4 1162 aaKnown RBP6.66□□□□□ -1.34
CLN5-212ENST00000636602 DNAJA1P31689 397 aaKnown RBP6.65□□□□□ -1.34
CLN5-212ENST00000636602 ERVK-24P63145 666 aa6.65□□□□□ -1.34
CLN5-212ENST00000636602 FAAP100Q0VG06 881 aa6.65□□□□□ -1.34
CLN5-212ENST00000636602 NFIXQ14938 502 aa6.65□□□□□ -1.34
CLN5-212ENST00000636602 ZC3H12AQ5D1E8 599 aaKnown RBP6.65□□□□□ -1.34
CLN5-212ENST00000636602 HSPA12BQ96MM6 686 aa6.65□□□□□ -1.34
CLN5-212ENST00000636602 KCNC2Q96PR1 638 aa6.65□□□□□ -1.34
CLN5-212ENST00000636602 EOMESO95936 686 aa6.64□□□□□ -1.35
CLN5-212ENST00000636602 ATP2B1P20020 1258 aa6.64□□□□□ -1.35
CLN5-212ENST00000636602 FCGRTP55899 365 aa6.64□□□□□ -1.35
CLN5-212ENST00000636602 FOXQ1Q9C009 403 aa6.64□□□□□ -1.35
CLN5-212ENST00000636602 ABCB6Q9NP58 842 aa6.64□□□□□ -1.35
CLN5-212ENST00000636602 ARID5AQ03989 594 aa6.63□□□□□ -1.35
CLN5-212ENST00000636602 ERMP1Q7Z2K6 904 aa6.63□□□□□ -1.35
CLN5-212ENST00000636602 PDZD3Q86UT5 571 aa6.63□□□□□ -1.35
CLN5-212ENST00000636602 C3orf58Q8NDZ4 430 aa6.63□□□□□ -1.35
CLN5-212ENST00000636602 KCNB2Q92953 911 aa6.63□□□□□ -1.35
CLN5-212ENST00000636602 COPRSQ9NQ92 184 aa6.63□□□□□ -1.35
CLN5-212ENST00000636602 MAPK8IP1Q9UQF2 711 aa6.63□□□□□ -1.35
CLN5-212ENST00000636602 RAC2P15153 192 aa6.62□□□□□ -1.35
CLN5-212ENST00000636602 GTF2F1P35269 517 aaKnown RBP eCLIP6.62□□□□□ -1.35
CLN5-212ENST00000636602 CCDC85BQ15834 202 aaPredicted RBP6.62□□□□□ -1.35
CLN5-212ENST00000636602 PRPF40BQ6NWY9 871 aaKnown RBP6.62□□□□□ -1.35
CLN5-212ENST00000636602 DTHD1Q6ZMT9 781 aa6.62□□□□□ -1.35
CLN5-212ENST00000636602 VPS37DQ86XT2 251 aa6.62□□□□□ -1.35
CLN5-212ENST00000636602 DHX38Q92620 1227 aaKnown RBP6.62□□□□□ -1.35
CLN5-212ENST00000636602 ALPK1Q96QP1 1244 aa6.62□□□□□ -1.35
CLN5-212ENST00000636602 DNAJC2Q99543 621 aaKnown RBP6.62□□□□□ -1.35
CLN5-212ENST00000636602 NOC4LQ9BVI4 516 aaKnown RBP6.62□□□□□ -1.35
CLN5-212ENST00000636602 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
CLN5-212ENST00000636602 KBTBD4Q9NVX7 518 aa6.62□□□□□ -1.35
CLN5-212ENST00000636602 AKAP2Q9Y2D5 859 aa6.62□□□□□ -1.35
CLN5-212ENST00000636602 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
CLN5-212ENST00000636602 NFKB2Q00653 900 aa6.61□□□□□ -1.35
CLN5-212ENST00000636602 PRRT2Q7Z6L0 340 aaPredicted RBP6.61□□□□□ -1.35
CLN5-212ENST00000636602 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
CLN5-212ENST00000636602 CXorf38Q8TB03 319 aa6.61□□□□□ -1.35
CLN5-212ENST00000636602 BAHD1Q8TBE0 780 aaPredicted RBP6.61□□□□□ -1.35
CLN5-212ENST00000636602 GMLQ99445 158 aa6.61□□□□□ -1.35
CLN5-212ENST00000636602 RTEL1Q9NZ71 1219 aa6.61□□□□□ -1.35
CLN5-212ENST00000636602 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
CLN5-212ENST00000636602 F6X3S4 739 aa6.6□□□□□ -1.35
CLN5-212ENST00000636602 FBXO24O75426 580 aa6.6□□□□□ -1.35
CLN5-212ENST00000636602 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
CLN5-212ENST00000636602 PAK2Q13177 524 aa6.6□□□□□ -1.35
CLN5-212ENST00000636602 SKOR2Q2VWA4 1001 aaPredicted RBP6.6□□□□□ -1.35
CLN5-212ENST00000636602 CDKAL1Q5VV42 579 aa6.6□□□□□ -1.35
CLN5-212ENST00000636602 TTC6Q86TZ1 520 aa6.6□□□□□ -1.35
CLN5-212ENST00000636602 RELL1Q8IUW5 271 aa6.6□□□□□ -1.35
CLN5-212ENST00000636602 PPM1HQ9ULR3 514 aa6.6□□□□□ -1.35
CLN5-212ENST00000636602 CNTNAP4Q9C0A0 1308 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 PRR33A8MZF0 331 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 H3BS24 57 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 NTF4P34130 210 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 PWP1Q13610 501 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 MAP3K11Q16584 847 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 TPTE2Q6XPS3 522 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 UBE3DQ7Z6J8 389 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 GPRASP2Q96D09 838 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 SPON2Q9BUD6 331 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 RSRP1Q9BUV0 290 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 SLAMF8Q9P0V8 285 aa6.59□□□□□ -1.35
CLN5-212ENST00000636602 MINDY4BA8MYZ0 360 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 GBP2P32456 591 aaPredicted RBP6.58□□□□□ -1.36
CLN5-212ENST00000636602 GJA8P48165 433 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 ERVFC1P60507 584 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 PPM1JQ5JR12 505 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 SV2BQ7L1I2 683 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 DPH6Q7L8W6 267 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 KIAA0825Q8IV33 1275 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 FAM177A1Q8N128 213 aaPredicted RBP6.58□□□□□ -1.36
CLN5-212ENST00000636602 MYLIPQ8WY64 445 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 ARMC5Q96C12 935 aa6.58□□□□□ -1.36
CLN5-212ENST00000636602 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLN5-212ENST00000636602 RLBP1P12271 317 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 DLG4P78352 724 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 PPP2R3AQ06190 1150 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 TCERG1LQ5VWI1 586 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 C22orf34Q6ZV56 151 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 MCF2L2Q86YR7 1114 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 MFSD4AQ8N468 514 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 TMEM74Q96NL1 305 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 MCOLN1Q9GZU1 580 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 TMEM39AQ9NV64 488 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 ADAMTS1Q9UHI8 967 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 ST14Q9Y5Y6 855 aa6.57□□□□□ -1.36
CLN5-212ENST00000636602 SMARCA5O60264 1052 aaPredicted RBP6.56□□□□□ -1.36
CLN5-212ENST00000636602 TRIM13O60858 407 aa6.56□□□□□ -1.36
CLN5-212ENST00000636602 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
CLN5-212ENST00000636602 EIF4A3P38919 411 aaKnown RBP6.56□□□□□ -1.36
CLN5-212ENST00000636602 MAP1SQ66K74 1059 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms