RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 KCNJ4P48050 445 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 KCNJ6P48051 423 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 CACNB3P54284 484 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 CCL23P55773 120 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 IRX3P78415 501 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 PABPC4Q13310 644 aaKnown RBP eCLIP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 SMAD4Q13485 552 aaKnown RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 MOGSQ13724 837 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 SMAD2Q15796 467 aaKnown RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 PTPN21Q16825 1174 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 SPDYE2Q495Y8 402 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 TIGD5Q53EQ6 642 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 SLC10A5Q5PT55 438 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 N4BP2L1Q5TBK1 243 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 C1orf53Q5VUE5 145 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 IL31Q6EBC2 164 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 GIGYF2Q6Y7W6 1299 aaKnown RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 PRRT2Q7Z6L0 340 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 DEFB128Q7Z7B8 93 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 RNF180Q86T96 592 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 RPAINQ86UA6 219 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 ZNF34Q8IZ26 560 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 RPUSD2Q8IZ73 545 aaKnown RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 CRIPAKQ8N1N5 446 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 NUP133Q8WUM0 1156 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 DDX1Q92499 740 aaKnown RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 PABPC5Q96DU9 382 aaKnown RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 ZBED3Q96IU2 234 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 TEPSINQ96N21 525 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 PAGR1Q9BTK6 254 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 COA1Q9GZY4 146 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 CLMPQ9H6B4 373 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 XPNPEP3Q9NQH7 507 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 PODXL2Q9NZ53 605 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 CHD7Q9P2D1 2997 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 CTNNA3Q9UI47 895 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 CD207Q9UJ71 328 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 AGTPBP1Q9UPW5 1226 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 SLC45A1Q9Y2W3 748 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 NDUFB9Q9Y6M9 179 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 ZHX2Q9Y6X8 837 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 COL11A1P12107 1806 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 A0A1B0GUL6 1792 aa2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 SIPA1L3O60292 1781 aaPredicted RBP2.28□□□□□ -2.04
SYNGAP1-215ENST00000636443 BRWD1Q9NSI6 2320 aa2.28□□□□□ -2.05
SYNGAP1-215ENST00000636443 ADAMTS20P59510 1910 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 KIF16BQ96L93 1317 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 SIP14410 1827 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 A0A1B0GUL7 405 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 LPXNO60711 386 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 ARHGEF15O94989 841 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 PRB1P04280 392 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 HMOX1P09601 288 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 RARBP10826 455 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 PLA2G2AP14555 144 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 NCLP19338 710 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 SP100P23497 879 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 PMLP29590 882 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 NDUFV1P49821 464 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 EIF4G2P78344 907 aaKnown RBP eCLIP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 SHC2P98077 582 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 FOXC1Q12948 553 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 MTMR3Q13615 1198 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 MTHFSDQ2M296 383 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 COL28A1Q2UY09 1125 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 HSP90AB3PQ58FF7 597 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 TCEAL5Q5H9L2 206 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 FAM47AQ5JRC9 791 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 AMER1Q5JTC6 1135 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 VARS2Q5ST30 1063 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 TREML2Q5T2D2 321 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 GPR142Q7Z601 462 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 SPRED2Q7Z698 418 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 PLEKHH3Q7Z736 793 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 ANKRD18AQ8IVF6 992 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 HERC6Q8IVU3 1022 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 ZFPM1Q8IX07 1006 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 ZGPATQ8N5A5 531 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 KDF1Q8NAX2 398 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 DTWD2Q8NBA8 298 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 BANK1Q8NDB2 785 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 FBXO22Q8NEZ5 403 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 GPRC5AQ8NFJ5 357 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 TDRD7Q8NHU6 1098 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 NETO1Q8TDF5 533 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 SPIRE2Q8WWL2 714 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 EDC3Q96F86 508 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 TOX2Q96NM4 488 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 CCDC85AQ96PX6 553 aaPredicted RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 TGS1Q96RS0 853 aaKnown RBP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 SLC9A7Q96T83 725 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 FTOQ9C0B1 505 aaKnown RBP eCLIP2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 HIPK3Q9H422 1215 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 IGFLR1Q9H665 355 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 INCENPQ9NQS7 918 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 TSHZ2Q9NRE2 1034 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 POLKQ9UBT6 870 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 GMEB2Q9UKD1 530 aa2.27□□□□□ -2.05
SYNGAP1-215ENST00000636443 TBX21Q9UL17 535 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms