RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 USP17L17D6RBQ6 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 USP17L19D6RCP7 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 USP17L20D6RJB6 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 USP17L24Q0WX57 530 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 UBE3CQ15386 1083 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 C12orf42Q96LP6 360 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 SWAP70Q9UH65 585 aa21.59■■□□□ 1.05
PNKP-225ENST00000636214 MAPK4P31152 587 aa21.58■■□□□ 1.05
PNKP-225ENST00000636214 U2AF1L4Q8WU68 220 aaKnown RBP21.58■■□□□ 1.05
PNKP-225ENST00000636214 KIAA1683Q9H0B3 1180 aa21.58■■□□□ 1.05
PNKP-225ENST00000636214 DCTPP1Q9H773 170 aa21.58■■□□□ 1.05
PNKP-225ENST00000636214 HMGCRP04035 888 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 CAPN2P17655 700 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 ERVK-9P63128 1117 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 ERVK-24P63145 666 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 CCNA1P78396 465 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 GABPAQ06546 454 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 SEPT2Q15019 361 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 SOCS4Q8WXH5 440 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 SHISA4Q96DD7 197 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 NUDT12Q9BQG2 462 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 HTATIP2Q9BUP3 242 aa21.57■■□□□ 1.04
PNKP-225ENST00000636214 ZBTB47Q9UFB7 747 aaPredicted RBP21.57■■□□□ 1.04
PNKP-225ENST00000636214 BAZ2AQ9UIF9 1905 aaKnown RBP21.57■■□□□ 1.04
PNKP-225ENST00000636214 SLC34A2O95436 690 aa21.56■■□□□ 1.04
PNKP-225ENST00000636214 TFRCP02786 760 aaKnown RBP21.56■■□□□ 1.04
PNKP-225ENST00000636214 VCAM1P19320 739 aa21.56■■□□□ 1.04
PNKP-225ENST00000636214 TMEM179Q6ZVK1 233 aa21.56■■□□□ 1.04
PNKP-225ENST00000636214 SLC4A4Q9Y6R1 1079 aa21.56■■□□□ 1.04
PNKP-225ENST00000636214 PRKAB2O43741 272 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 FARP2O94887 1054 aaPredicted RBP21.55■■□□□ 1.04
PNKP-225ENST00000636214 SGPL1O95470 568 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 CYP2D6P10635 497 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 LRRFIP1Q32MZ4 808 aaKnown RBP21.55■■□□□ 1.04
PNKP-225ENST00000636214 ACER1Q8TDN7 264 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 DPF3Q92784 378 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 DEFB118Q96PH6 123 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 SH2D4AQ9H788 454 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 TXNRD2Q9NNW7 524 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 RABGAP1Q9Y3P9 1069 aa21.55■■□□□ 1.04
PNKP-225ENST00000636214 GLRX3O76003 335 aaKnown RBP21.54■■□□□ 1.04
PNKP-225ENST00000636214 CYP2B6P20813 491 aa21.54■■□□□ 1.04
PNKP-225ENST00000636214 SLFNL1Q499Z3 407 aa21.54■■□□□ 1.04
PNKP-225ENST00000636214 WDR78Q5VTH9 848 aa21.54■■□□□ 1.04
PNKP-225ENST00000636214 CATSPERGQ6ZRH7 1159 aa21.54■■□□□ 1.04
PNKP-225ENST00000636214 DYNLL2Q96FJ2 89 aa21.54■■□□□ 1.04
PNKP-225ENST00000636214 ARHGEF10LQ9HCE6 1279 aa21.54■■□□□ 1.04
PNKP-225ENST00000636214 RBPJLQ9UBG7 517 aa21.54■■□□□ 1.04
PNKP-225ENST00000636214 PLEKHH3Q7Z736 793 aa21.53■■□□□ 1.04
PNKP-225ENST00000636214 TRMT44Q8IYL2 757 aaKnown RBP21.53■■□□□ 1.04
PNKP-225ENST00000636214 SLC44A5Q8NCS7 719 aa21.53■■□□□ 1.04
PNKP-225ENST00000636214 CCDC17Q96LX7 622 aa21.53■■□□□ 1.04
PNKP-225ENST00000636214 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.53■■□□□ 1.04
PNKP-225ENST00000636214 RPAP3Q9H6T3 665 aaPredicted RBP21.53■■□□□ 1.04
PNKP-225ENST00000636214 GJD2Q9UKL4 321 aa21.53■■□□□ 1.04
PNKP-225ENST00000636214 ERC2O15083 957 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 PEX10O60683 326 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 GUCY1A2P33402 732 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 RGS2P41220 211 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 RRP1P56182 461 aaKnown RBP21.52■■□□□ 1.04
PNKP-225ENST00000636214 ICA1Q05084 483 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 GPR142Q7Z601 462 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 KBTBD3Q8NAB2 608 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 TANGO6Q9C0B7 1094 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 HMX1Q9NP08 348 aaPredicted RBP21.52■■□□□ 1.04
PNKP-225ENST00000636214 IVNS1ABPQ9Y6Y0 642 aa21.52■■□□□ 1.04
PNKP-225ENST00000636214 USP17L12C9JPN9 530 aa21.51■■□□□ 1.03
PNKP-225ENST00000636214 USP17L21D6R901 530 aa21.51■■□□□ 1.03
PNKP-225ENST00000636214 ZFYP08048 801 aaPredicted RBP21.51■■□□□ 1.03
PNKP-225ENST00000636214 ZKSCAN1P17029 563 aaPredicted RBP21.51■■□□□ 1.03
PNKP-225ENST00000636214 Q3C1V9 767 aa21.51■■□□□ 1.03
PNKP-225ENST00000636214 C12orf60Q5U649 245 aa21.51■■□□□ 1.03
PNKP-225ENST00000636214 PUS7LQ9H0K6 701 aaKnown RBP21.51■■□□□ 1.03
PNKP-225ENST00000636214 PAK6Q9NQU5 681 aaPredicted RBP21.51■■□□□ 1.03
PNKP-225ENST00000636214 ARPP21Q9UBL0 812 aaPredicted RBP21.51■■□□□ 1.03
PNKP-225ENST00000636214 RPTORQ8N122 1335 aa21.51■■□□□ 1.03
PNKP-225ENST00000636214 XRCC5P13010 732 aaKnown RBP21.5■■□□□ 1.03
PNKP-225ENST00000636214 CDK8P49336 464 aa21.5■■□□□ 1.03
PNKP-225ENST00000636214 EVX2Q03828 476 aa21.5■■□□□ 1.03
PNKP-225ENST00000636214 TSHZ3Q63HK5 1081 aa21.5■■□□□ 1.03
PNKP-225ENST00000636214 PORCNQ9H237 461 aa21.5■■□□□ 1.03
PNKP-225ENST00000636214 CHGBP05060 677 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 AKR1B1P15121 316 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 C16orf86Q6ZW13 317 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 TRIB2Q92519 343 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 APPBP2Q92624 585 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 LPAR1Q92633 364 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 APBA2Q99767 749 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 HOXC10Q9NYD6 342 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 NR2E3Q9Y5X4 410 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 TTC41PQ6P2S7 1318 aa21.49■■□□□ 1.03
PNKP-225ENST00000636214 PLXNB2O15031 1838 aa21.48■■□□□ 1.03
PNKP-225ENST00000636214 CYP2D7A0A087X1C5 515 aa21.48■■□□□ 1.03
PNKP-225ENST00000636214 SPDYE16A6NNV3 312 aaPredicted RBP21.48■■□□□ 1.03
PNKP-225ENST00000636214 RNF113AO15541 343 aaKnown RBP21.48■■□□□ 1.03
PNKP-225ENST00000636214 ATP2B2Q01814 1243 aa21.48■■□□□ 1.03
PNKP-225ENST00000636214 LBX2Q6XYB7 198 aa21.48■■□□□ 1.03
PNKP-225ENST00000636214 YTHDC1Q96MU7 727 aaKnown RBP21.48■■□□□ 1.03
PNKP-225ENST00000636214 PCDHB15Q9Y5E8 787 aa21.48■■□□□ 1.03
PNKP-225ENST00000636214 A0A1W2PRG0 241 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms