RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MYSM1Q5VVJ2 828 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 MAMSTRQ6ZN01 415 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 ZNF654Q8IZM8 581 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 JMYQ8N9B5 988 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 FANCBQ8NB91 859 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 MORC4Q8TE76 937 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 USP28Q96RU2 1077 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 SLC26A6Q9BXS9 759 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 CD209Q9NNX6 404 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 FAM217BQ9NTX9 383 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 TNRC6CQ9HCJ0 1690 aaKnown RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 A0A1W2PQ27 194 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 A0A1W2PQ64 194 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 A0A1W2PQD8 194 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 SH3BP5O60239 455 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 DEXIO95424 95 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 USP5P45974 858 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 CEBPZQ03701 1054 aaKnown RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 DDR1Q08345 913 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 SEC23AQ15436 765 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 KRT40Q6A162 431 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 ADALQ6DHV7 355 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 RINLQ6ZS11 566 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 CCAR1Q8IX12 1150 aaKnown RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 ZNF287Q9HBT7 754 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 SENP2Q9HC62 589 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 G3BP2Q9UN86 482 aaKnown RBP8.26□□□□□ -1.09
BRCA1-230ENST00000634433 TNKSO95271 1327 aa8.26□□□□□ -1.09
BRCA1-230ENST00000634433 MYH13Q9UKX3 1938 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 DUOX1Q9NRD9 1551 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 PPFIA3O75145 1194 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 DDAH1O94760 285 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 NPR1P16066 1061 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 SASS6Q6UVJ0 657 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 CRACR2BQ8N4Y2 399 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 RNF214Q8ND24 703 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 NKX2-3Q8TAU0 364 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 AKT1S1Q96B36 256 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 PDLIM2Q96JY6 352 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 CALR3Q96L12 384 aaKnown RBP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 ZKSCAN3Q9BRR0 538 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 FUCA2Q9BTY2 467 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 PARP3Q9Y6F1 533 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 MAST2Q6P0Q8 1798 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 CCDC88AQ3V6T2 1871 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 PPEF1O14829 653 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 SPTLC2O15270 562 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 POLR3DP05423 398 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 RXRAP19793 462 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 U2AF2P26368 475 aaKnown RBP eCLIP8.25□□□□□ -1.099e-7■■■□□ 19.1
BRCA1-230ENST00000634433 APLP1P51693 650 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 OTUD7BQ6GQQ9 843 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 RBM43Q6ZSC3 357 aaKnown RBP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 STK11IPQ8N1F8 1099 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 LINC00301Q8NCQ3 95 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 TBC1D16Q8TBP0 767 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 NUP133Q8WUM0 1156 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 MRPS27Q92552 414 aaKnown RBP8.25□□□□□ -1.09
BRCA1-230ENST00000634433 GLMNQ92990 594 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 PHKBQ93100 1093 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 MYL10Q9BUA6 226 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 MCM9Q9NXL9 1143 aa8.25□□□□□ -1.09
BRCA1-230ENST00000634433 MROH7-TTC4A0A0A0MT08 1334 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 C6orf229H3BNL8 230 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 KINO60870 393 aaKnown RBP8.24□□□□□ -1.09
BRCA1-230ENST00000634433 NR1I2O75469 434 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 FAM160A1Q05DH4 1040 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 LONRF3Q496Y0 759 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 ANO1Q5XXA6 986 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 ENAHQ8N8S7 591 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-230ENST00000634433 FAM163AQ96GL9 167 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-230ENST00000634433 RNF26Q9BY78 433 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-230ENST00000634433 COA1Q9GZY4 146 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 FAN1Q9Y2M0 1017 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 ATP6V0A2Q9Y487 856 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 C12orf60Q5U649 245 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 KRBA2Q6ZNG9 492 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 COL23A1Q86Y22 540 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-230ENST00000634433 FSIP1Q8NA03 581 aa8.24□□□□□ -1.09
BRCA1-230ENST00000634433 PROCA1Q8NCQ7 364 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-230ENST00000634433 FOXP1Q9H334 677 aaPredicted RBP8.24□□□□□ -1.09
BRCA1-230ENST00000634433 FAM205AQ6ZU69 1335 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 CYP2D7A0A087X1C5 515 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 TSPY2A6NKD2 308 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 PPP6R2O75170 966 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 RHBDL3P58872 404 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 TYRO3Q06418 890 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 SLC39A14Q15043 492 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 CAMK4Q16566 473 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 CTCFLQ8NI51 663 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-230ENST00000634433 FAM200AQ8TCP9 573 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 SPACA7Q96KW9 195 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
BRCA1-230ENST00000634433 ZC3H12CQ9C0D7 883 aaKnown RBP8.23□□□□□ -1.09
BRCA1-230ENST00000634433 MKNK2Q9HBH9 465 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 CCDC39Q9UFE4 941 aa8.23□□□□□ -1.09
BRCA1-230ENST00000634433 PCDHA7Q9UN72 937 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms