RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 MAPKAPK5Q8IW41 473 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 ADAMTS19Q8TE59 1207 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 SH3RF3Q8TEJ3 882 aaPredicted RBP9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 NSUN4Q96CB9 384 aaKnown RBP9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 TIFAQ96CG3 184 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 ASB2Q96Q27 587 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 UHRF1Q96T88 793 aaPredicted RBP9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 C1QTNF1Q9BXJ1 281 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 EMILIN3Q9NT22 766 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 AATFQ9NY61 560 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 THEGQ9P2T0 379 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 PA2G4Q9UQ80 394 aaKnown RBP9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 DOCK1Q14185 1865 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 DOCK2Q92608 1830 aa9.38□□□□□ -0.91
SPTAN1-215ENST00000628867 TRIM43BA6NCK2 446 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 DCDC2CA8MYV0 355 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 SEPT4O43236 478 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 PQBP1O60828 265 aaKnown RBP9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 HOXC6P09630 235 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 RARBP10826 455 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 DNAJB2P25686 324 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 PLS1Q14651 629 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 SH3RF1Q7Z6J0 888 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 RNF180Q86T96 592 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 NPLOC4Q8TAT6 608 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 VTI1AQ96AJ9 217 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 TRIM43Q96BQ3 446 aaPredicted RBP9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 PDLIM7Q9NR12 457 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 HOXC10Q9NYD6 342 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 SAP30BPQ9UHR5 308 aaKnown RBP9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 PALD1Q9ULE6 856 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 ZBTB21Q9ULJ3 1066 aa9.37□□□□□ -0.91
SPTAN1-215ENST00000628867 COL2A1P02458 1487 aaPredicted RBP9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 APBB1O00213 710 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 GH2P01242 217 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 UQCRFS1P1P0C7P4 283 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 CYBAP13498 195 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 USP5P45974 858 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 TFCP2Q12800 502 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 GRB14Q14449 540 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 LRRC41Q15345 812 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 CCDC184Q52MB2 194 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 SLC44A5Q8NCS7 719 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 HMG20BQ9P0W2 317 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 MSRAQ9UJ68 235 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 MYH2Q9UKX2 1941 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
SPTAN1-215ENST00000628867 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 ADORA2AP29274 412 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 G3BP1Q13283 466 aaKnown RBP eCLIP9.35□□□□□ -0.911e-11■■■■■ 39
SPTAN1-215ENST00000628867 COG2Q14746 738 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 AAK1Q2M2I8 961 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 CERKLQ49MI3 558 aaPredicted RBP9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 CCDC158Q5M9N0 1113 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 PRAMEF19Q5SWL8 479 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 AKNAD1Q5T1N1 836 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 C1orf53Q5VUE5 145 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 OLFML2BQ68BL8 750 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 SAMD1Q6SPF0 538 aaPredicted RBP9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 NCAPG2Q86XI2 1143 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 USP38Q8NB14 1042 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 TRPV1Q8NER1 839 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 TANGO6Q9C0B7 1094 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 PRDM12Q9H4Q4 367 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 COPRSQ9NQ92 184 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 XPNPEP3Q9NQH7 507 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 MYH13Q9UKX3 1938 aa9.35□□□□□ -0.91
SPTAN1-215ENST00000628867 UNC80Q8N2C7 3258 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 ZBTB22O15209 634 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 SRGAP3O43295 1099 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 CNMDO75829 334 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 PPIGQ13427 754 aaKnown RBP eCLIP9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 SNX17Q15036 470 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 ABCB5Q2M3G0 1257 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 TTC39AQ5SRH9 613 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 TTC6Q86TZ1 520 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 MICALL1Q8N3F8 863 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 MTIF3Q9H2K0 278 aaKnown RBP9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 RPAP3Q9H6T3 665 aaPredicted RBP9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 SLC28A3Q9HAS3 691 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 BTBD7Q9P203 1132 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 PTPRFP10586 1907 aa9.34□□□□□ -0.91
SPTAN1-215ENST00000628867 MPHOSPH10O00566 681 aaKnown RBP9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 KIAA0355O15063 1070 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 PGK1P00558 417 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 FCER1AP12319 257 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 VCAM1P19320 739 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 ERCC3P19447 782 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 JAG1P78504 1218 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 RAB30Q15771 203 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 FAM47AQ5JRC9 791 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 PI16Q6UXB8 463 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 TMEM199Q8N511 208 aa9.33□□□□□ -0.92
SPTAN1-215ENST00000628867 SSH1Q8WYL5 1049 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms