RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 USP17L18D6R9N7 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 USP17L22D6RA61 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 USP17L17D6RBQ6 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 USP17L19D6RCP7 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 USP17L20D6RJB6 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 PEX10O60683 326 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 INHAP05111 366 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 GJA8P48165 433 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 USP17L24Q0WX57 530 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 SEPT2Q15019 361 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 ZYXQ15942 572 aaKnown RBP14.6□□□□□ -0.07
UBR1-212ENST00000627960 GTF3C2Q8WUA4 911 aaPredicted RBP14.6□□□□□ -0.07
UBR1-212ENST00000627960 SHISA4Q96DD7 197 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 UNC93B1Q9H1C4 597 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 TXNRD2Q9NNW7 524 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 PCDHB15Q9Y5E8 787 aa14.6□□□□□ -0.07
UBR1-212ENST00000627960 RRP1P56182 461 aaKnown RBP14.59□□□□□ -0.07
UBR1-212ENST00000627960 Q3C1V9 767 aa14.59□□□□□ -0.07
UBR1-212ENST00000627960 POTEEQ6S8J3 1075 aa14.59□□□□□ -0.07
UBR1-212ENST00000627960 CATSPERGQ6ZRH7 1159 aa14.59□□□□□ -0.07
UBR1-212ENST00000627960 DYNLL2Q96FJ2 89 aa14.59□□□□□ -0.07
UBR1-212ENST00000627960 GPATCH3Q96I76 525 aa14.59□□□□□ -0.07
UBR1-212ENST00000627960 PUS7LQ9H0K6 701 aaKnown RBP14.59□□□□□ -0.07
UBR1-212ENST00000627960 SWAP70Q9UH65 585 aa14.59□□□□□ -0.07
UBR1-212ENST00000627960 MPHOSPH10O00566 681 aaKnown RBP14.58□□□□□ -0.08
UBR1-212ENST00000627960 ERVK-9P63128 1117 aa14.58□□□□□ -0.08
UBR1-212ENST00000627960 ERVK-24P63145 666 aa14.58□□□□□ -0.08
UBR1-212ENST00000627960 C12orf60Q5U649 245 aa14.58□□□□□ -0.08
UBR1-212ENST00000627960 SLC44A5Q8NCS7 719 aa14.58□□□□□ -0.08
UBR1-212ENST00000627960 SLC4A4Q9Y6R1 1079 aa14.58□□□□□ -0.08
UBR1-212ENST00000627960 CYP2D7A0A087X1C5 515 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 A0A1W2PRG0 241 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 USP17L12C9JPN9 530 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 USP17L21D6R901 530 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 SGPL1O95470 568 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 VCAM1P19320 739 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 MAPK4P31152 587 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 TMEM179Q6ZVK1 233 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 AMOTL1Q8IY63 956 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 KBTBD3Q8NAB2 608 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 U2AF1L4Q8WU68 220 aaKnown RBP14.57□□□□□ -0.08
UBR1-212ENST00000627960 DDRGK1Q96HY6 314 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 PAGR1Q9BTK6 254 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 RABGAP1Q9Y3P9 1069 aa14.57□□□□□ -0.08
UBR1-212ENST00000627960 SMIM22K7EJ46 135 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 RNF113AO15541 343 aaKnown RBP14.56□□□□□ -0.08
UBR1-212ENST00000627960 CNMDO75829 334 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 SLC34A2O95436 690 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 HMGCRP04035 888 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 AKR1B1P15121 316 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 CAPN2P17655 700 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 CDK8P49336 464 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 TSHZ3Q63HK5 1081 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 CTR9Q6PD62 1173 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 UBE2Q1Q7Z7E8 422 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 STRBPQ96SI9 672 aaKnown RBP14.56□□□□□ -0.08
UBR1-212ENST00000627960 NUDT12Q9BQG2 462 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 PORCNQ9H237 461 aa14.56□□□□□ -0.08
UBR1-212ENST00000627960 RPAP3Q9H6T3 665 aaPredicted RBP14.56□□□□□ -0.08
UBR1-212ENST00000627960 PAK6Q9NQU5 681 aaPredicted RBP14.56□□□□□ -0.08
UBR1-212ENST00000627960 CEP290O15078 2479 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 RLFQ13129 1914 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 CYP2B6P20813 491 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 LBX2Q6XYB7 198 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 C16orf86Q6ZW13 317 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 PLEKHH3Q7Z736 793 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 SIAH1Q8IUQ4 282 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 CCAR1Q8IX12 1150 aaKnown RBP14.55□□□□□ -0.08
UBR1-212ENST00000627960 CCDC17Q96LX7 622 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 DEFB118Q96PH6 123 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 TTC41PQ6P2S7 1318 aa14.55□□□□□ -0.08
UBR1-212ENST00000627960 TFRCP02786 760 aaKnown RBP14.54□□□□□ -0.08
UBR1-212ENST00000627960 ZFYP08048 801 aaPredicted RBP14.54□□□□□ -0.08
UBR1-212ENST00000627960 XRCC5P13010 732 aaKnown RBP14.54□□□□□ -0.08
UBR1-212ENST00000627960 CCNA1P78396 465 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 SBK1Q52WX2 424 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 MORN1Q5T089 497 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 GPR142Q7Z601 462 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 SOCS4Q8WXH5 440 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 TRIB2Q92519 343 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 APPBP2Q92624 585 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 USP6NLQ92738 828 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 OSBP2Q969R2 916 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 GCC1Q96CN9 775 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 CRISPLD2Q9H0B8 497 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.54□□□□□ -0.08
UBR1-212ENST00000627960 ARHGEF10LQ9HCE6 1279 aa14.54□□□□□ -0.08
UBR1-212ENST00000627960 RPTORQ8N122 1335 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 SPDYE16A6NNV3 312 aaPredicted RBP14.53□□□□□ -0.08
UBR1-212ENST00000627960 GSG1L2A8MUP6 293 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 ERC2O15083 957 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 FARP2O94887 1054 aaPredicted RBP14.53□□□□□ -0.08
UBR1-212ENST00000627960 ICA1Q05084 483 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 TRIM32Q13049 653 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 COG2Q14746 738 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 KIAA1755Q5JYT7 1200 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 GIMAP6Q6P9H5 292 aa14.53□□□□□ -0.08
UBR1-212ENST00000627960 TRMT44Q8IYL2 757 aaKnown RBP14.53□□□□□ -0.08
UBR1-212ENST00000627960 PI4K2BQ8TCG2 481 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms