RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 USP17L13C9JLJ4 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 USP17L11C9JVI0 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 USP17L18D6R9N7 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 USP17L22D6RA61 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 USP17L17D6RBQ6 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 USP17L19D6RCP7 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 USP17L20D6RJB6 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 USP17L24Q0WX57 530 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 UBE3CQ15386 1083 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 TXNRD2Q9NNW7 524 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 ECHDC1Q9NTX5 307 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 SWAP70Q9UH65 585 aa30.91■■■□□ 2.54
TCF4-259ENST00000627568 HMGCRP04035 888 aa30.9■■■□□ 2.54
TCF4-259ENST00000627568 MAPK4P31152 587 aa30.9■■■□□ 2.54
TCF4-259ENST00000627568 ERVK-9P63128 1117 aa30.9■■■□□ 2.54
TCF4-259ENST00000627568 ERVK-24P63145 666 aa30.9■■■□□ 2.54
TCF4-259ENST00000627568 SLFNL1Q499Z3 407 aa30.9■■■□□ 2.54
TCF4-259ENST00000627568 ACER1Q8TDN7 264 aa30.9■■■□□ 2.54
TCF4-259ENST00000627568 CEP290O15078 2479 aa30.9■■■□□ 2.54
TCF4-259ENST00000627568 SGPL1O95470 568 aa30.89■■■□□ 2.54
TCF4-259ENST00000627568 VCAM1P19320 739 aa30.89■■■□□ 2.54
TCF4-259ENST00000627568 SEPT2Q15019 361 aa30.89■■■□□ 2.54
TCF4-259ENST00000627568 SOCS4Q8WXH5 440 aa30.89■■■□□ 2.54
TCF4-259ENST00000627568 DCTPP1Q9H773 170 aa30.89■■■□□ 2.54
TCF4-259ENST00000627568 RBPJLQ9UBG7 517 aa30.89■■■□□ 2.54
TCF4-259ENST00000627568 GJD2Q9UKL4 321 aa30.89■■■□□ 2.54
TCF4-259ENST00000627568 PRKAB2O43741 272 aa30.88■■■□□ 2.53
TCF4-259ENST00000627568 PEX10O60683 326 aa30.88■■■□□ 2.53
TCF4-259ENST00000627568 CYP2D6P10635 497 aa30.88■■■□□ 2.53
TCF4-259ENST00000627568 CAPN2P17655 700 aa30.88■■■□□ 2.53
TCF4-259ENST00000627568 EVX2Q03828 476 aa30.88■■■□□ 2.53
TCF4-259ENST00000627568 NUDT12Q9BQG2 462 aa30.88■■■□□ 2.53
TCF4-259ENST00000627568 CWC22Q9HCG8 908 aaKnown RBP30.88■■■□□ 2.53
TCF4-259ENST00000627568 PLXNB2O15031 1838 aa30.87■■■□□ 2.53
TCF4-259ENST00000627568 FARP2O94887 1054 aaPredicted RBP30.87■■■□□ 2.53
TCF4-259ENST00000627568 GUCY1A2P33402 732 aa30.87■■■□□ 2.53
TCF4-259ENST00000627568 DEFB118Q96PH6 123 aa30.87■■■□□ 2.53
TCF4-259ENST00000627568 HTATIP2Q9BUP3 242 aa30.87■■■□□ 2.53
TCF4-259ENST00000627568 CATSPERGQ6ZRH7 1159 aa30.86■■■□□ 2.53
TCF4-259ENST00000627568 TMEM179Q6ZVK1 233 aa30.86■■■□□ 2.53
TCF4-259ENST00000627568 SLC44A5Q8NCS7 719 aa30.86■■■□□ 2.53
TCF4-259ENST00000627568 PAK6Q9NQU5 681 aaPredicted RBP30.86■■■□□ 2.53
TCF4-259ENST00000627568 RABGAP1Q9Y3P9 1069 aa30.86■■■□□ 2.53
TCF4-259ENST00000627568 SLC4A4Q9Y6R1 1079 aa30.86■■■□□ 2.53
TCF4-259ENST00000627568 TFRCP02786 760 aaKnown RBP30.85■■■□□ 2.53
TCF4-259ENST00000627568 CCNA1P78396 465 aa30.85■■■□□ 2.53
TCF4-259ENST00000627568 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.85■■■□□ 2.53
TCF4-259ENST00000627568 CHGBP05060 677 aa30.84■■■□□ 2.53
TCF4-259ENST00000627568 CYP2B6P20813 491 aa30.84■■■□□ 2.53
TCF4-259ENST00000627568 UBE2Q1Q7Z7E8 422 aa30.84■■■□□ 2.53
TCF4-259ENST00000627568 DPF3Q92784 378 aa30.84■■■□□ 2.53
TCF4-259ENST00000627568 DYNLL2Q96FJ2 89 aa30.84■■■□□ 2.53
TCF4-259ENST00000627568 PORCNQ9H237 461 aa30.84■■■□□ 2.53
TCF4-259ENST00000627568 RPAP3Q9H6T3 665 aaPredicted RBP30.84■■■□□ 2.53
TCF4-259ENST00000627568 Q3C1V9 767 aa30.83■■■□□ 2.53
TCF4-259ENST00000627568 GPR142Q7Z601 462 aa30.83■■■□□ 2.53
TCF4-259ENST00000627568 PLEKHH3Q7Z736 793 aa30.83■■■□□ 2.53
TCF4-259ENST00000627568 USP17L12C9JPN9 530 aa30.82■■■□□ 2.52
TCF4-259ENST00000627568 USP17L21D6R901 530 aa30.82■■■□□ 2.52
TCF4-259ENST00000627568 C12orf60Q5U649 245 aa30.82■■■□□ 2.52
TCF4-259ENST00000627568 PUS7LQ9H0K6 701 aaKnown RBP30.82■■■□□ 2.52
TCF4-259ENST00000627568 HMX1Q9NP08 348 aaPredicted RBP30.82■■■□□ 2.52
TCF4-259ENST00000627568 RPTORQ8N122 1335 aa30.81■■■□□ 2.52
TCF4-259ENST00000627568 XRCC5P13010 732 aaKnown RBP30.81■■■□□ 2.52
TCF4-259ENST00000627568 TRMT44Q8IYL2 757 aaKnown RBP30.81■■■□□ 2.52
TCF4-259ENST00000627568 KBTBD3Q8NAB2 608 aa30.81■■■□□ 2.52
TCF4-259ENST00000627568 TRIB2Q92519 343 aa30.81■■■□□ 2.52
TCF4-259ENST00000627568 CCDC17Q96LX7 622 aa30.81■■■□□ 2.52
TCF4-259ENST00000627568 SH2D4AQ9H788 454 aa30.81■■■□□ 2.52
TCF4-259ENST00000627568 ARHGEF10LQ9HCE6 1279 aa30.81■■■□□ 2.52
TCF4-259ENST00000627568 GLRX3O76003 335 aaKnown RBP30.8■■■□□ 2.52
TCF4-259ENST00000627568 RGS2P41220 211 aa30.8■■■□□ 2.52
TCF4-259ENST00000627568 ICA1Q05084 483 aa30.8■■■□□ 2.52
TCF4-259ENST00000627568 TSHZ3Q63HK5 1081 aa30.8■■■□□ 2.52
TCF4-259ENST00000627568 POTEEQ6S8J3 1075 aa30.8■■■□□ 2.52
TCF4-259ENST00000627568 LBX2Q6XYB7 198 aa30.8■■■□□ 2.52
TCF4-259ENST00000627568 ARPP21Q9UBL0 812 aaPredicted RBP30.8■■■□□ 2.52
TCF4-259ENST00000627568 CYP2D7A0A087X1C5 515 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 A0A1W2PRG0 241 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 CNMDO75829 334 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 AKR1B1P15121 316 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 ZKSCAN1P17029 563 aaPredicted RBP30.79■■■□□ 2.52
TCF4-259ENST00000627568 CDK8P49336 464 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 RRP1P56182 461 aaKnown RBP30.79■■■□□ 2.52
TCF4-259ENST00000627568 WDR78Q5VTH9 848 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 C16orf86Q6ZW13 317 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 TANGO6Q9C0B7 1094 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 CRISPLD2Q9H0B8 497 aa30.79■■■□□ 2.52
TCF4-259ENST00000627568 SPDYE16A6NNV3 312 aaPredicted RBP30.78■■■□□ 2.52
TCF4-259ENST00000627568 H0YGN5 161 aa30.78■■■□□ 2.52
TCF4-259ENST00000627568 TRIM32Q13049 653 aa30.78■■■□□ 2.52
TCF4-259ENST00000627568 HABP4Q5JVS0 413 aaKnown RBP30.78■■■□□ 2.52
TCF4-259ENST00000627568 APBA2Q99767 749 aa30.78■■■□□ 2.52
TCF4-259ENST00000627568 ZFYP08048 801 aaPredicted RBP30.77■■■□□ 2.52
TCF4-259ENST00000627568 LRRFIP1Q32MZ4 808 aaKnown RBP30.77■■■□□ 2.52
TCF4-259ENST00000627568 APPBP2Q92624 585 aa30.77■■■□□ 2.52
TCF4-259ENST00000627568 LPAR1Q92633 364 aa30.77■■■□□ 2.52
TCF4-259ENST00000627568 PCDHB15Q9Y5E8 787 aa30.77■■■□□ 2.52
TCF4-259ENST00000627568 ERC2O15083 957 aa30.76■■■□□ 2.51
TCF4-259ENST00000627568 PRKAR2AP13861 404 aaKnown RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms