RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 VCAM1P19320 739 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 MAPK4P31152 587 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 UBE3CQ15386 1083 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 ABCB5Q2M3G0 1257 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 CERKLQ49MI3 558 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-226ENST00000626926 C20orf194Q5TEA3 1177 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 LCORLQ8N3X6 602 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 ANKLE1Q8NAG6 615 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 GPRC5AQ8NFJ5 357 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 DNAJC2Q99543 621 aaKnown RBP10.65□□□□□ -0.7
CPSF7-226ENST00000626926 HTATIP2Q9BUP3 242 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.65□□□□□ -0.76e-10■■■■■ 30.6
CPSF7-226ENST00000626926 PRO3102Q9H379 93 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 ATP8A2Q9NTI2 1148 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 BIN2Q9UBW5 565 aaPredicted RBP10.65□□□□□ -0.7
CPSF7-226ENST00000626926 RABGAP1Q9Y3P9 1069 aa10.65□□□□□ -0.7
CPSF7-226ENST00000626926 RPTORQ8N122 1335 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 LAMA3Q16787 3333 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L15C9J2P7 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L13C9JLJ4 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L11C9JVI0 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L18D6R9N7 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L22D6RA61 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L17D6RBQ6 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L19D6RCP7 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 H0YGN5 161 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 CNMDO75829 334 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 MORN1Q5T089 497 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 CATSPERGQ6ZRH7 1159 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 TRMT44Q8IYL2 757 aaKnown RBP10.64□□□□□ -0.71
CPSF7-226ENST00000626926 SDR42E1Q8WUS8 393 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 TRIB2Q92519 343 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 EDC3Q96F86 508 aaKnown RBP10.64□□□□□ -0.71
CPSF7-226ENST00000626926 DEFB118Q96PH6 123 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 LRRCC1Q9C099 1032 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.64□□□□□ -0.71
CPSF7-226ENST00000626926 PORCNQ9H237 461 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 MCM9Q9NXL9 1143 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 SWAP70Q9UH65 585 aa10.64□□□□□ -0.71
CPSF7-226ENST00000626926 SZT2Q5T011 3432 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 IGHA2P01877 340 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-226ENST00000626926 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-226ENST00000626926 FXR1P51114 621 aaKnown RBP eCLIP10.63□□□□□ -0.71
CPSF7-226ENST00000626926 EVX2Q03828 476 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 Q3C1V9 767 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 TMEM179Q6ZVK1 233 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 GPR142Q7Z601 462 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 ACER1Q8TDN7 264 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 FEZ1Q99689 392 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 NUDT12Q9BQG2 462 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 CABP5Q9NP86 173 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 ROBO3Q96MS0 1386 aa10.63□□□□□ -0.71
CPSF7-226ENST00000626926 COL11A1P12107 1806 aaPredicted RBP10.63□□□□□ -0.71
CPSF7-226ENST00000626926 A0A1W2PRG0 241 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-226ENST00000626926 APBB1O00213 710 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 PEX10O60683 326 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 MBD4O95243 580 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 HOXC6P09630 235 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 CCNA1P78396 465 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 C12orf60Q5U649 245 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 LPAR1Q92633 364 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 APBA2Q99767 749 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 BOLA2Q9H3K6 86 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 DCTPP1Q9H773 170 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 ARMT1Q9H993 441 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-226ENST00000626926 OGDHLQ9ULD0 1010 aa10.62□□□□□ -0.71
CPSF7-226ENST00000626926 COLQQ9Y215 455 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-226ENST00000626926 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
CPSF7-226ENST00000626926 RGS2P41220 211 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 TRIM32Q13049 653 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 GRB14Q14449 540 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 SEPT2Q15019 361 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 ZSCAN25Q6NSZ9 544 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 C16orf86Q6ZW13 317 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 PLEKHH3Q7Z736 793 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 SIAH1Q8IUQ4 282 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 SLC44A5Q8NCS7 719 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 CCDC17Q96LX7 622 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 ECHDC1Q9NTX5 307 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 TMX2Q9Y320 296 aa10.61□□□□□ -0.71
CPSF7-226ENST00000626926 A0A1W2PPC1 479 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 SLC15A5A6NIM6 579 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 PRKAB2O43741 272 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 CHGBP05060 677 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 CYP2D6P10635 497 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 ZKSCAN1P17029 563 aaPredicted RBP10.6□□□□□ -0.71
CPSF7-226ENST00000626926 CYP2B6P20813 491 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 MAP2K5Q13163 448 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 ZYXQ15942 572 aaKnown RBP10.6□□□□□ -0.71
CPSF7-226ENST00000626926 SLFNL1Q499Z3 407 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 GIMAP6Q6P9H5 292 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 MB21D1Q8N884 522 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 KBTBD3Q8NAB2 608 aa10.6□□□□□ -0.71
CPSF7-226ENST00000626926 SHCBP1Q8NEM2 672 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms