RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 MLECQ14165 292 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 UVSSAQ2YD98 709 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 INTS3Q68E01 1043 aaKnown RBP4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 VHLLQ6RSH7 139 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 NOP9Q86U38 636 aaKnown RBP4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 FAM20CQ8IXL6 584 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 FAM178BQ8IXR5 827 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 PHACTR4Q8IZ21 702 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 RIN3Q8TB24 985 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 MKL1Q969V6 931 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 ZNF512BQ96KM6 892 aaPredicted RBP4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 MIPEPQ99797 713 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 FOXQ1Q9C009 403 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 C1GALT1Q9NS00 363 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 MRPL42Q9Y6G3 142 aaKnown RBP4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 CNTNAP4Q9C0A0 1308 aa4.2□□□□□ -1.74
SCARNA4-202ENST00000625402 C1QTNF9BB2RNN3 333 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 RGS13O14921 159 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 U2SURPO15042 1029 aaKnown RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 SART1O43290 800 aaKnown RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 CBFA2T2O43439 604 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 DIAPH1O60610 1272 aaKnown RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 LEFTY1O75610 366 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 SLITRK5O94991 958 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 BMP3P12645 472 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 MAP4P27816 1152 aaKnown RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 NFE2L2Q16236 605 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 FXNQ16595 210 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 CDC37L1Q7L3B6 337 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 SHISA5Q8N114 240 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 FAM177A1Q8N128 213 aaPredicted RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 KCT2Q8NC54 265 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 GATA6Q92908 595 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 PHAXQ9H814 394 aaKnown RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 SUSD2Q9UGT4 822 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 PCOLCE2Q9UKZ9 415 aa4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 ZNF214Q9UL59 606 aaPredicted RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 R3HCC1Q9Y3T6 440 aaKnown RBP4.19□□□□□ -1.74
SCARNA4-202ENST00000625402 SHROOM4Q9ULL8 1493 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 SHOXO15266 292 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 PDPK1O15530 556 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 DDAH1O94760 285 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 ADMP35318 185 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 CCNFP41002 786 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 USP11P51784 963 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 PMS1P54277 932 aaKnown RBP4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 RASGRF1Q13972 1273 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 SLC10A6Q3KNW5 377 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 KIAA1211LQ6NV74 962 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 LETMD1Q6P1Q0 360 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 SPATC1Q76KD6 591 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 LILRB2Q8N423 598 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 TOP6BLQ8N6T0 577 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 MRFAP1L1Q96HT8 127 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 RNPC3Q96LT9 517 aaKnown RBP4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 CCDC74BQ96LY2 380 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 DNAJC7Q99615 494 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 LGR4Q9BXB1 951 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 CCDC113Q9H0I3 377 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 SUCOQ9UBS9 1254 aaKnown RBP4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 U3KQE9 123 aa4.18□□□□□ -1.74
SCARNA4-202ENST00000625402 FAM95CA0A1B0GW59 222 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 SUSD5O60279 629 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 CLEC3AO75596 197 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 EOMESO95936 686 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 TP53P04637 393 aaPredicted RBP4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 EPHX1P07099 455 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 RXRBP28702 533 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 GNPTABQ3T906 1256 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 AXDND1Q5T1B0 1012 aaPredicted RBP4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 DCAF15Q66K64 600 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 BEND4Q6ZU67 534 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 LRP10Q7Z4F1 713 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 CDH24Q86UP0 819 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 ALYREFQ86V81 257 aaKnown RBP4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 VWCEQ96DN2 955 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 KREMEN1Q96MU8 473 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 DUSP23Q9BVJ7 150 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 SSU72Q9NP77 194 aaKnown RBP4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 PRDM10Q9NQV6 1147 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 APEX2Q9UBZ4 518 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 PFDN2Q9UHV9 154 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 SLC12A7Q9Y666 1083 aa4.17□□□□□ -1.74
SCARNA4-202ENST00000625402 CADPSQ9ULU8 1353 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 TLDC2A0PJX2 215 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 HMX2A2RU54 273 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 GBP1P32455 592 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 SLC7A5Q01650 507 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 KCNMA1Q12791 1236 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 SQSTM1Q13501 440 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 SNW1Q13573 536 aaKnown RBP4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 MAP7Q14244 749 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 NCAPHQ15003 741 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 TCEAL1Q15170 157 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 NBPF12Q5TAG4 269 aaPredicted RBP4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 SDE2Q6IQ49 451 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 ZNF662Q6ZS27 426 aa4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 ZNF513Q8N8E2 541 aaPredicted RBP4.16□□□□□ -1.74
SCARNA4-202ENST00000625402 MFSD2AQ8NA29 543 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms