RNA–Protein interactions for RNA: ENST00000625395.1

SEC23A-215, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5 BASIC

Gene SEC23A, Length 261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-215ENST00000625395 HTR3BO95264 441 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 RNASE1P07998 156 aaKnown RBP6.6□□□□□ -1.35
SEC23A-215ENST00000625395 VAMP1P23763 118 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 MLECQ14165 292 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 LDLRAD1Q5T700 205 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 CDH24Q86UP0 819 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 FAM13CQ8NE31 585 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 PPP1R13LQ8WUF5 828 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 HSPA12BQ96MM6 686 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 COPRSQ9NQ92 184 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 METTL5Q9NRN9 209 aaKnown RBP6.6□□□□□ -1.35
SEC23A-215ENST00000625395 REV1Q9UBZ9 1251 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 GGT7Q9UJ14 662 aa6.6□□□□□ -1.35
SEC23A-215ENST00000625395 POLR3KQ9Y2Y1 108 aaPredicted RBP6.6□□□□□ -1.35
SEC23A-215ENST00000625395 CD96P40200 585 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 ZP2Q05996 745 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 FAM160A1Q05DH4 1040 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 IKZF1Q13422 519 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 REXO1Q8N1G1 1221 aaKnown RBP6.59□□□□□ -1.35
SEC23A-215ENST00000625395 FLAD1Q8NFF5 587 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 XAGE3Q8WTP9 111 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 CCDC120Q96HB5 630 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 DPH2Q9BQC3 489 aaPredicted RBP6.59□□□□□ -1.35
SEC23A-215ENST00000625395 RC3H2Q9HBD1 1191 aaKnown RBP6.59□□□□□ -1.35
SEC23A-215ENST00000625395 ADAMTS6Q9UKP5 1117 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 RNF114Q9Y508 228 aa6.59□□□□□ -1.35
SEC23A-215ENST00000625395 NESP48681 1621 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 F6X3S4 739 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 PAPLNO95428 1278 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 TNK2Q07912 1038 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 TMPRSS7Q7RTY8 843 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 ZNF296Q8WUU4 475 aaPredicted RBP6.58□□□□□ -1.36
SEC23A-215ENST00000625395 RNF141Q8WVD5 230 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 CCDC74BQ96LY2 380 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 NT5C1AQ9BXI3 368 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 EHMT1Q9H9B1 1298 aa6.58□□□□□ -1.36
SEC23A-215ENST00000625395 UPK3BL1B0FP48 263 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 UPK3BL2E5RIL1 263 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 CBX7O95931 251 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 SRFP11831 508 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 TMEM87AQ8NBN3 555 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 LRRN4CLQ8ND94 238 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 GPR62Q9BZJ7 368 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 TRIT1Q9H3H1 467 aaKnown RBP6.57□□□□□ -1.36
SEC23A-215ENST00000625395 ADAMTS1Q9UHI8 967 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 KCNH3Q9ULD8 1083 aa6.57□□□□□ -1.36
SEC23A-215ENST00000625395 ZNF76P36508 570 aa6.56□□□□□ -1.36
SEC23A-215ENST00000625395 CDKAL1Q5VV42 579 aa6.56□□□□□ -1.36
SEC23A-215ENST00000625395 FBXO27Q8NI29 283 aa6.56□□□□□ -1.36
SEC23A-215ENST00000625395 Q96M66 194 aa6.56□□□□□ -1.36
SEC23A-215ENST00000625395 ASPNQ9BXN1 380 aa6.56□□□□□ -1.36
SEC23A-215ENST00000625395 ATP13A1Q9HD20 1204 aa6.56□□□□□ -1.36
SEC23A-215ENST00000625395 GMIPQ9P107 970 aa6.56□□□□□ -1.36
SEC23A-215ENST00000625395 H3BS24 57 aa6.55□□□□□ -1.36
SEC23A-215ENST00000625395 RGS13O14921 159 aa6.55□□□□□ -1.36
SEC23A-215ENST00000625395 GRIN3BO60391 1043 aa6.55□□□□□ -1.36
SEC23A-215ENST00000625395 CCNFP41002 786 aa6.55□□□□□ -1.36
SEC23A-215ENST00000625395 CDCP2Q5VXM1 449 aa6.55□□□□□ -1.36
SEC23A-215ENST00000625395 SLITRK4Q8IW52 837 aa6.55□□□□□ -1.36
SEC23A-215ENST00000625395 BACH2Q9BYV9 841 aa6.55□□□□□ -1.36
SEC23A-215ENST00000625395 DUSP15Q9H1R2 295 aaPredicted RBP6.55□□□□□ -1.36
SEC23A-215ENST00000625395 SLC22A31A6NKX4 558 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
SEC23A-215ENST00000625395 CHURC1-FNTBB4DL54 471 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 CRKP46108 304 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 ZNF165P49910 485 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 FANCCQ00597 558 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 GAB4Q2WGN9 574 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 LRRFIP1Q32MZ4 808 aaKnown RBP6.54□□□□□ -1.36
SEC23A-215ENST00000625395 DTWD2Q8NBA8 298 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 TMEM40Q8WWA1 233 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 UBE2FQ969M7 185 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 KRTAP4-12Q9BQ66 201 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 GOLGA2P5Q9HBQ8 144 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 BRMS1Q9HCU9 246 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 GPATCH2Q9NW75 528 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 CTNND2Q9UQB3 1225 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 PCDHB14Q9Y5E9 798 aa6.54□□□□□ -1.36
SEC23A-215ENST00000625395 TLR3O15455 904 aaKnown RBP6.53□□□□□ -1.36
SEC23A-215ENST00000625395 DNAJA2O60884 412 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 GDNFP39905 211 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 AFMP43652 599 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 RAD51AP2Q09MP3 1159 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 APOBRQ0VD83 1088 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 KIAA0825Q8IV33 1275 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 VWCEQ96DN2 955 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 KREMEN1Q96MU8 473 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.53□□□□□ -1.36
SEC23A-215ENST00000625395 CARS2Q9HA77 564 aaKnown RBP6.53□□□□□ -1.36
SEC23A-215ENST00000625395 ZSWIM5Q9P217 1185 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 KLHL3Q9UH77 587 aa6.53□□□□□ -1.36
SEC23A-215ENST00000625395 CARMIL2Q6F5E8 1435 aa6.52□□□□□ -1.37
SEC23A-215ENST00000625395 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
SEC23A-215ENST00000625395 MEIS3P2A8K0S8 358 aa6.52□□□□□ -1.37
SEC23A-215ENST00000625395 TNNI2P48788 182 aa6.52□□□□□ -1.37
SEC23A-215ENST00000625395 RNF4P78317 190 aa6.52□□□□□ -1.37
SEC23A-215ENST00000625395 TSPYL5Q86VY4 417 aaPredicted RBP6.52□□□□□ -1.37
SEC23A-215ENST00000625395 PHACTR4Q8IZ21 702 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms