RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SOCS4Q8WXH5 440 aa13.51□□□□□ -0.25
DDX41-218ENST00000625286 C12orf42Q96LP6 360 aa13.51□□□□□ -0.25
DDX41-218ENST00000625286 BTBD7Q9P203 1132 aa13.51□□□□□ -0.25
DDX41-218ENST00000625286 IDH1O75874 414 aaKnown RBP13.5□□□□□ -0.25
DDX41-218ENST00000625286 ZKSCAN1P17029 563 aaPredicted RBP13.5□□□□□ -0.25
DDX41-218ENST00000625286 SHMT1P34896 483 aa13.5□□□□□ -0.25
DDX41-218ENST00000625286 RIOK1Q9BRS2 568 aaKnown RBP13.5□□□□□ -0.25
DDX41-218ENST00000625286 RLFQ13129 1914 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 FRMPD3Q5JV73 1810 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 HLA-DOAP06340 250 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 VCAM1P19320 739 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 RGS2P41220 211 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 LRIT3Q3SXY7 679 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 TRPV1Q8NER1 839 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 NPLOC4Q8TAT6 608 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 APBA2Q99767 749 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 KIAA1683Q9H0B3 1180 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 EHD4Q9H223 541 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 RABGAP1Q9Y3P9 1069 aa13.49□□□□□ -0.25
DDX41-218ENST00000625286 A0A1W2PRG0 241 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 DLL1O00548 723 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 IGSF3O75054 1194 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 USP5P45974 858 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 GABPAQ06546 454 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 PDE3AQ14432 1141 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 RAB3GAP1Q15042 981 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 CERKLQ49MI3 558 aaPredicted RBP13.48□□□□□ -0.25
DDX41-218ENST00000625286 CEP85Q6P2H3 762 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 TRMT44Q8IYL2 757 aaKnown RBP13.48□□□□□ -0.25
DDX41-218ENST00000625286 DEFB123Q8N688 67 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 EDC3Q96F86 508 aaKnown RBP13.48□□□□□ -0.25
DDX41-218ENST00000625286 EXOC6BQ9Y2D4 811 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 EYSQ5T1H1 3165 aa13.48□□□□□ -0.25
DDX41-218ENST00000625286 SPDYE16A6NNV3 312 aaPredicted RBP13.47□□□□□ -0.25
DDX41-218ENST00000625286 SMIM22K7EJ46 135 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 PTPREP23469 700 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 SEPT2Q15019 361 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 ABCB5Q2M3G0 1257 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 SLFNL1Q499Z3 407 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 GPR153Q6NV75 609 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 LBX2Q6XYB7 198 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 SIAH1Q8IUQ4 282 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 ITPRIPQ8IWB1 547 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 TDHQ8IZJ6 230 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 GTF3C2Q8WUA4 911 aaPredicted RBP13.47□□□□□ -0.25
DDX41-218ENST00000625286 MTMR10Q9NXD2 777 aa13.47□□□□□ -0.25
DDX41-218ENST00000625286 SLC15A5A6NIM6 579 aa13.46□□□□□ -0.25
DDX41-218ENST00000625286 HOXC6P09630 235 aa13.46□□□□□ -0.25
DDX41-218ENST00000625286 CYP2D6P10635 497 aa13.46□□□□□ -0.25
DDX41-218ENST00000625286 CYP2C19P33261 490 aa13.46□□□□□ -0.25
DDX41-218ENST00000625286 MDM2Q00987 491 aaPredicted RBP13.46□□□□□ -0.25
DDX41-218ENST00000625286 GRB14Q14449 540 aa13.46□□□□□ -0.25
DDX41-218ENST00000625286 AACSQ86V21 672 aa13.46□□□□□ -0.25
DDX41-218ENST00000625286 FEZ1Q99689 392 aa13.46□□□□□ -0.25
DDX41-218ENST00000625286 UBE2OQ9C0C9 1292 aaKnown RBP13.46□□□□□ -0.25
DDX41-218ENST00000625286 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
DDX41-218ENST00000625286 VCANP13611 3396 aa13.45□□□□□ -0.26
DDX41-218ENST00000625286 TCRBV5S4A2TA0A5A2 114 aa13.45□□□□□ -0.26
DDX41-218ENST00000625286 MAP3K12Q12852 859 aa13.45□□□□□ -0.26
DDX41-218ENST00000625286 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
DDX41-218ENST00000625286 CCAR1Q8IX12 1150 aaKnown RBP13.45□□□□□ -0.26
DDX41-218ENST00000625286 SLC44A5Q8NCS7 719 aa13.45□□□□□ -0.26
DDX41-218ENST00000625286 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
DDX41-218ENST00000625286 SENP6Q9GZR1 1112 aaPredicted RBP13.45□□□□□ -0.26
DDX41-218ENST00000625286 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
DDX41-218ENST00000625286 COBLO75128 1261 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 CHGBP05060 677 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 PDE6AP16499 860 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 USP14P54578 494 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 WDR78Q5VTH9 848 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 CLEC10AQ8IUN9 316 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 SIRT2Q8IXJ6 389 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 MOV10L1Q9BXT6 1211 aaKnown RBP13.44□□□□□ -0.26
DDX41-218ENST00000625286 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
DDX41-218ENST00000625286 PRUNE2Q8WUY3 3088 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 CDH23Q9H251 3354 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 SMCHD1A6NHR9 2005 aa13.44□□□□□ -0.26
DDX41-218ENST00000625286 MAGEB6P1A0A0J9YX57 407 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 POTEB2H3BUK9 544 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 PRKAB2O43741 272 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 CYBAP13498 195 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 ATN1P54259 1190 aaPredicted RBP13.43□□□□□ -0.26
DDX41-218ENST00000625286 CCNA1P78396 465 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 ATP2B2Q01814 1243 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 MFSD14CQ5VZR4 134 aa13.43□□□□□ -0.26
DDX41-218ENST00000625286 FTSJ3Q8IY81 847 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms