RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 FSD1Q9BTV5 496 aa23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 CRNKL1Q9BZJ0 848 aaKnown RBP23.94■■□□□ 1.42
R3HCC1-210ENST00000625275 CCL5P13501 91 aa23.93■■□□□ 1.42
R3HCC1-210ENST00000625275 HOXA7P31268 230 aaPredicted RBP23.93■■□□□ 1.42
R3HCC1-210ENST00000625275 SHISA4Q96DD7 197 aa23.93■■□□□ 1.42
R3HCC1-210ENST00000625275 TCRBV5S4A2TA0A5A2 114 aa23.92■■□□□ 1.42
R3HCC1-210ENST00000625275 CHGBP05060 677 aa23.92■■□□□ 1.42
R3HCC1-210ENST00000625275 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.92■■□□□ 1.42
R3HCC1-210ENST00000625275 ELNP15502 786 aa23.91■■□□□ 1.42
R3HCC1-210ENST00000625275 NKX2-3Q8TAU0 364 aa23.91■■□□□ 1.42
R3HCC1-210ENST00000625275 PXYLP1Q8TE99 480 aa23.91■■□□□ 1.42
R3HCC1-210ENST00000625275 MORF4L1Q9UBU8 362 aa23.91■■□□□ 1.42
R3HCC1-210ENST00000625275 GJB1P08034 283 aa23.9■■□□□ 1.42
R3HCC1-210ENST00000625275 PLCD1P51178 756 aa23.9■■□□□ 1.42
R3HCC1-210ENST00000625275 USP17L2Q6R6M4 530 aa23.9■■□□□ 1.42
R3HCC1-210ENST00000625275 RNF208Q9H0X6 261 aa23.9■■□□□ 1.42
R3HCC1-210ENST00000625275 POLR3DP05423 398 aaPredicted RBP23.89■■□□□ 1.42
R3HCC1-210ENST00000625275 SHMT1P34896 483 aa23.89■■□□□ 1.42
R3HCC1-210ENST00000625275 ADD2P35612 726 aa23.89■■□□□ 1.42
R3HCC1-210ENST00000625275 SLFNL1Q499Z3 407 aa23.89■■□□□ 1.42
R3HCC1-210ENST00000625275 CERKLQ49MI3 558 aaPredicted RBP23.89■■□□□ 1.42
R3HCC1-210ENST00000625275 LCORLQ8N3X6 602 aa23.89■■□□□ 1.42
R3HCC1-210ENST00000625275 FEZ1Q99689 392 aa23.89■■□□□ 1.42
R3HCC1-210ENST00000625275 INHAP05111 366 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 GJA8P48165 433 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 HERVK_113P62684 666 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 ABCB5Q2M3G0 1257 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 P2RX7Q99572 595 aaKnown RBP23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 EMILIN3Q9NT22 766 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 MCM9Q9NXL9 1143 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 TAOK2Q9UL54 1235 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 PARP14Q460N5 1801 aa23.88■■□□□ 1.41
R3HCC1-210ENST00000625275 GABPAQ06546 454 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 RAB3GAP1Q15042 981 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 ZSCAN25Q6NSZ9 544 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 SDR42E1Q8WUS8 393 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 C12orf42Q96LP6 360 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 UNC93B1Q9H1C4 597 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 RNF113AO15541 343 aaKnown RBP23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 UBE3CQ15386 1083 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 ARMT1Q9H993 441 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 CABP5Q9NP86 173 aa23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 DCP1AQ9NPI6 582 aaPredicted RBP23.87■■□□□ 1.41
R3HCC1-210ENST00000625275 RLFQ13129 1914 aa23.86■■□□□ 1.41
R3HCC1-210ENST00000625275 MBD4O95243 580 aa23.86■■□□□ 1.41
R3HCC1-210ENST00000625275 ZFYP08048 801 aaPredicted RBP23.86■■□□□ 1.41
R3HCC1-210ENST00000625275 ZYXQ15942 572 aaKnown RBP23.86■■□□□ 1.41
R3HCC1-210ENST00000625275 LRRFIP1Q32MZ4 808 aaKnown RBP23.86■■□□□ 1.41
R3HCC1-210ENST00000625275 GTF3C2Q8WUA4 911 aaPredicted RBP23.86■■□□□ 1.41
R3HCC1-210ENST00000625275 TXNRD2Q9NNW7 524 aa23.86■■□□□ 1.41
R3HCC1-210ENST00000625275 ALPK3Q96L96 1907 aa23.85■■□□□ 1.41
R3HCC1-210ENST00000625275 TICAM2Q86XR7 235 aa23.85■■□□□ 1.41
R3HCC1-210ENST00000625275 U2AF1L4Q8WU68 220 aaKnown RBP23.85■■□□□ 1.41
R3HCC1-210ENST00000625275 KIAA1683Q9H0B3 1180 aa23.85■■□□□ 1.41
R3HCC1-210ENST00000625275 USP14P54578 494 aa23.84■■□□□ 1.41
R3HCC1-210ENST00000625275 EVX2Q03828 476 aa23.84■■□□□ 1.41
R3HCC1-210ENST00000625275 GPRC5AQ8NFJ5 357 aa23.84■■□□□ 1.41
R3HCC1-210ENST00000625275 GJD2Q9UKL4 321 aa23.84■■□□□ 1.41
R3HCC1-210ENST00000625275 PEX10O60683 326 aa23.83■■□□□ 1.41
R3HCC1-210ENST00000625275 ACER1Q8TDN7 264 aa23.83■■□□□ 1.41
R3HCC1-210ENST00000625275 APPBP2Q92624 585 aa23.83■■□□□ 1.41
R3HCC1-210ENST00000625275 RBPJLQ9UBG7 517 aa23.83■■□□□ 1.41
R3HCC1-210ENST00000625275 A0A0G2JMZ2 1700 aa23.83■■□□□ 1.41
R3HCC1-210ENST00000625275 FRMPD3Q5JV73 1810 aa23.83■■□□□ 1.41
R3HCC1-210ENST00000625275 CYP2D6P10635 497 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 GUCY1A2P33402 732 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 ERVK-9P63128 1117 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 ERVK-24P63145 666 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 ZMYM1Q5SVZ6 1142 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 PAGR1Q9BTK6 254 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 ATP8A2Q9NTI2 1148 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 TRIOBPQ9H2D6 2365 aa23.82■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L15C9J2P7 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L13C9JLJ4 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L11C9JVI0 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L18D6R9N7 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L22D6RA61 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L17D6RBQ6 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L19D6RCP7 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L20D6RJB6 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 PRKAB2O43741 272 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 SGPL1O95470 568 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 HMGCRP04035 888 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 VCAM1P19320 739 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 USP17L24Q0WX57 530 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 SEPT2Q15019 361 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 UBE2Q1Q7Z7E8 422 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 OSBP2Q969R2 916 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 FAM227BQ96M60 508 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 PUS7LQ9H0K6 701 aaKnown RBP23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 PAK6Q9NQU5 681 aaPredicted RBP23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 DIAPH3Q9NSV4 1193 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 COL11A1P12107 1806 aaPredicted RBP23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 A0A0D9SFI3 127 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 HIP1O00291 1037 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 CHMLP26374 656 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 MAPK4P31152 587 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 NMIQ13287 307 aaPredicted RBP23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 SLC44A5Q8NCS7 719 aa23.81■■□□□ 1.4
R3HCC1-210ENST00000625275 SOCS4Q8WXH5 440 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms