RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 EMILIN3Q9NT22 766 aa15.13■□□□□ 0.01
PNKP-217ENST00000625216 MORF4L1Q9UBU8 362 aa15.13■□□□□ 0.01
PNKP-217ENST00000625216 FOCADQ5VW36 1801 aa15.13■□□□□ 0.01
PNKP-217ENST00000625216 PHIPQ8WWQ0 1821 aa15.13■□□□□ 0.01
PNKP-217ENST00000625216 SLFNL1Q499Z3 407 aa15.12■□□□□ 0.01
PNKP-217ENST00000625216 C12orf60Q5U649 245 aa15.12■□□□□ 0.01
PNKP-217ENST00000625216 PXYLP1Q8TE99 480 aa15.12■□□□□ 0.01
PNKP-217ENST00000625216 CCDC17Q96LX7 622 aa15.12■□□□□ 0.01
PNKP-217ENST00000625216 P2RX7Q99572 595 aaKnown RBP15.12■□□□□ 0.01
PNKP-217ENST00000625216 FEZ1Q99689 392 aa15.12■□□□□ 0.01
PNKP-217ENST00000625216 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
PNKP-217ENST00000625216 SLC4A4Q9Y6R1 1079 aa15.12■□□□□ 0.01
PNKP-217ENST00000625216 SIPA1L1O43166 1804 aa15.12■□□□□ 0.01
PNKP-217ENST00000625216 CENPFP49454 3210 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L15C9J2P7 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L13C9JLJ4 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L11C9JVI0 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L21D6R901 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L18D6R9N7 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L22D6RA61 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L17D6RBQ6 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L19D6RCP7 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L20D6RJB6 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
PNKP-217ENST00000625216 CDC45O75419 566 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 FLT3LGP49771 235 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 HERVK_113P62684 666 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 UBXN2AP68543 259 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 USP17L24Q0WX57 530 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 GIMAP6Q6P9H5 292 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 TMEM179Q6ZVK1 233 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 GPRC5AQ8NFJ5 357 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 APPBP2Q92624 585 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 STRBPQ96SI9 672 aaKnown RBP15.11■□□□□ 0.01
PNKP-217ENST00000625216 GABRQQ9UN88 632 aa15.11■□□□□ 0.01
PNKP-217ENST00000625216 MPHOSPH10O00566 681 aaKnown RBP15.1■□□□□ 0.01
PNKP-217ENST00000625216 CHGBP05060 677 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 CYP2D6P10635 497 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 CAPN2P17655 700 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 GNAT2P19087 354 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 EN2P19622 333 aaPredicted RBP15.1■□□□□ 0.01
PNKP-217ENST00000625216 GUCY1A2P33402 732 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 SEPT2Q15019 361 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 ACER1Q8TDN7 264 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 BIN2Q9UBW5 565 aaPredicted RBP15.1■□□□□ 0.01
PNKP-217ENST00000625216 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
PNKP-217ENST00000625216 PTPRFP10586 1907 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 TRIM6-TRIM34B2RNG4 842 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 ADCY3O60266 1144 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 SEC24BO95487 1268 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 CDK8P49336 464 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 SBK1Q52WX2 424 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 CTR9Q6PD62 1173 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 CATSPERGQ6ZRH7 1159 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 C16orf86Q6ZW13 317 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 NKX2-3Q8TAU0 364 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 OSBP2Q969R2 916 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 DYNLL2Q96FJ2 89 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 RBPJLQ9UBG7 517 aa15.09■□□□□ 0.01
PNKP-217ENST00000625216 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
PNKP-217ENST00000625216 KIAA0100Q14667 2235 aaKnown RBP15.08■□□□□ 0
PNKP-217ENST00000625216 MYH1P12882 1939 aa15.08■□□□□ 0
PNKP-217ENST00000625216 GJB1P08034 283 aa15.08■□□□□ 0
PNKP-217ENST00000625216 MAPK4P31152 587 aa15.08■□□□□ 0
PNKP-217ENST00000625216 EVX2Q03828 476 aa15.08■□□□□ 0
PNKP-217ENST00000625216 ZYXQ15942 572 aaKnown RBP15.08■□□□□ 0
PNKP-217ENST00000625216 SLC44A5Q8NCS7 719 aa15.08■□□□□ 0
PNKP-217ENST00000625216 SH2D4AQ9H788 454 aa15.08■□□□□ 0
PNKP-217ENST00000625216 RABGAP1Q9Y3P9 1069 aa15.08■□□□□ 0
PNKP-217ENST00000625216 LOC285556D6RIA3 1793 aa15.08■□□□□ 0
PNKP-217ENST00000625216 GSG1L2A8MUP6 293 aa15.07■□□□□ 0
PNKP-217ENST00000625216 VCAM1P19320 739 aa15.07■□□□□ 0
PNKP-217ENST00000625216 ERVK-9P63128 1117 aa15.07■□□□□ 0
PNKP-217ENST00000625216 ERVK-24P63145 666 aa15.07■□□□□ 0
PNKP-217ENST00000625216 MTFR1Q15390 333 aa15.07■□□□□ 0
PNKP-217ENST00000625216 LBX2Q6XYB7 198 aa15.07■□□□□ 0
PNKP-217ENST00000625216 CCAR1Q8IX12 1150 aaKnown RBP15.07■□□□□ 0
PNKP-217ENST00000625216 ARHGEF10LQ9HCE6 1279 aa15.07■□□□□ 0
PNKP-217ENST00000625216 HOXC10Q9NYD6 342 aa15.07■□□□□ 0
PNKP-217ENST00000625216 GJD2Q9UKL4 321 aa15.07■□□□□ 0
PNKP-217ENST00000625216 ATAD5Q96QE3 1844 aa15.07■□□□□ 0
PNKP-217ENST00000625216 CYP2D7A0A087X1C5 515 aa15.06■□□□□ 0
PNKP-217ENST00000625216 A0A1W2PRG0 241 aa15.06■□□□□ 0
PNKP-217ENST00000625216 TNRC18O15417 2968 aaPredicted RBP15.06■□□□□ 0
PNKP-217ENST00000625216 GPAA1O43292 621 aa15.06■□□□□ 0
PNKP-217ENST00000625216 MYCP01106 439 aaPredicted RBP15.06■□□□□ 0
PNKP-217ENST00000625216 CCL5P13501 91 aa15.06■□□□□ 0
PNKP-217ENST00000625216 AKR1B1P15121 316 aa15.06■□□□□ 0
PNKP-217ENST00000625216 CCNA1P78396 465 aa15.06■□□□□ 0
PNKP-217ENST00000625216 PRPF38BQ5VTL8 546 aaKnown RBP15.06■□□□□ 0
PNKP-217ENST00000625216 TICAM2Q86XR7 235 aa15.06■□□□□ 0
PNKP-217ENST00000625216 LPAR1Q92633 364 aa15.06■□□□□ 0
PNKP-217ENST00000625216 RNF208Q9H0X6 261 aa15.06■□□□□ 0
PNKP-217ENST00000625216 KANSL2Q9H9L4 492 aa15.06■□□□□ 0
PNKP-217ENST00000625216 TXNRD2Q9NNW7 524 aa15.06■□□□□ 0
PNKP-217ENST00000625216 TMX2Q9Y320 296 aa15.06■□□□□ 0
PNKP-217ENST00000625216 PATL2C9JE40 543 aaKnown RBP15.05■□□□□ -0
PNKP-217ENST00000625216 CHMLP26374 656 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms