RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 EPN1Q9Y6I3 576 aaPredicted RBP17.09■□□□□ 0.33
PMS1-221ENST00000624204 ZMYM6O95789 1325 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 KIAA1328Q86T90 577 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 JAKMIP2Q96AA8 810 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
PMS1-221ENST00000624204 ANGEL1Q9UNK9 670 aaKnown RBP17.09■□□□□ 0.33
PMS1-221ENST00000624204 CTNND2Q9UQB3 1225 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 SARSP49591 514 aaKnown RBP17.09■□□□□ 0.33
PMS1-221ENST00000624204 ANKRD13DQ6ZTN6 518 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 ANKARQ7Z5J8 1434 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 TRIML1Q8N9V2 468 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 AIDAQ96BJ3 306 aa17.09■□□□□ 0.33
PMS1-221ENST00000624204 RRP36Q96EU6 259 aaKnown RBP17.09■□□□□ 0.33
PMS1-221ENST00000624204 GOLGA8AA7E2F4 631 aa17.08■□□□□ 0.33
PMS1-221ENST00000624204 SCP2P22307 547 aa17.08■□□□□ 0.33
PMS1-221ENST00000624204 NOSTRINQ8IVI9 506 aa17.08■□□□□ 0.33
PMS1-221ENST00000624204 CCDC51Q96ER9 411 aa17.08■□□□□ 0.33
PMS1-221ENST00000624204 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.33
PMS1-221ENST00000624204 FAM170AA1A519 330 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 CCDC70Q6NSX1 233 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 CCNI2Q6ZMN8 369 aaPredicted RBP17.08■□□□□ 0.32
PMS1-221ENST00000624204 CEP57Q86XR8 500 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 NALCNQ8IZF0 1738 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 NDUFA10O95299 355 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 PDIA6Q15084 440 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 NBPF14Q5TI25 921 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 DIS3L2Q8IYB7 885 aaKnown RBP17.08■□□□□ 0.32
PMS1-221ENST00000624204 CNPY4Q8N129 248 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 PCDHB6Q9Y5E3 794 aa17.08■□□□□ 0.32
PMS1-221ENST00000624204 ZBTB43O43298 467 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 PBX1P40424 430 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 ZNF622Q969S3 477 aaKnown RBP eCLIP17.07■□□□□ 0.32
PMS1-221ENST00000624204 MACROD2A1Z1Q3 448 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 SLC7A5Q01650 507 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 CKAP4Q07065 602 aaKnown RBP17.07■□□□□ 0.32
PMS1-221ENST00000624204 APOA5Q6Q788 366 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 PRPF38AQ8NAV1 312 aaKnown RBP17.07■□□□□ 0.32
PMS1-221ENST00000624204 NUP133Q8WUM0 1156 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 CSRNP2Q9H175 543 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 FBXO2Q9UK22 296 aaPredicted RBP17.07■□□□□ 0.32
PMS1-221ENST00000624204 TECPR2O15040 1411 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 GRIN2DO15399 1336 aa17.07■□□□□ 0.32
PMS1-221ENST00000624204 KIF1CO43896 1103 aaKnown RBP17.06■□□□□ 0.32
PMS1-221ENST00000624204 PTPREP23469 700 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 KRT31Q15323 416 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
PMS1-221ENST00000624204 NT5DC1Q5TFE4 455 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 SH2D3CQ8N5H7 860 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 BLZF1Q9H2G9 400 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 B4E1Z4 1266 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 NR5A1Q13285 461 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 KANK3Q6NY19 840 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 B4GALNT4Q76KP1 1039 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 FBXL16Q8N461 479 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 PUS7LQ9H0K6 701 aaKnown RBP17.06■□□□□ 0.32
PMS1-221ENST00000624204 ACTN4O43707 911 aaKnown RBP17.06■□□□□ 0.32
PMS1-221ENST00000624204 SMARCAL1Q9NZC9 954 aa17.06■□□□□ 0.32
PMS1-221ENST00000624204 TOB1P50616 345 aaPredicted RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 UBXN1Q04323 297 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 ACTN3Q08043 901 aaPredicted RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 EZH2Q15910 746 aaKnown RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 LRRC24Q50LG9 513 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 NKX2-3Q8TAU0 364 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 N4BP2L2Q92802 583 aaPredicted RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 ARL8AQ96BM9 186 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 FAM184BQ9ULE4 1060 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 REXO2Q9Y3B8 237 aaKnown RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 UBN2Q6ZU65 1347 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 NWD1Q149M9 1564 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 PTPRUQ92729 1446 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 FOXP2O15409 715 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 RANBP6O60518 1105 aaKnown RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 IDEP14735 1019 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 NF2P35240 595 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 PPARAQ07869 468 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 SSRP1Q08945 709 aaKnown RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 CYB5R4Q7L1T6 521 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 EPSTI1Q96J88 318 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 PDE2AO00408 941 aaPredicted RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 GPTP24298 496 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 RNASE9P60153 205 aaKnown RBP17.05■□□□□ 0.32
PMS1-221ENST00000624204 PPP2R5AQ15172 486 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 HAUS4Q9H6D7 363 aa17.05■□□□□ 0.32
PMS1-221ENST00000624204 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 TARSL2A2RTX5 802 aaKnown RBP17.04■□□□□ 0.32
PMS1-221ENST00000624204 HDAC7Q8WUI4 952 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 SLC24A3Q9HC58 644 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 BACH1O14867 736 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 GPAA1O43292 621 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 OPA1O60313 960 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 CXCR5P32302 372 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 GUCY1A2P33402 732 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 NEDD9Q14511 834 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 CDKAL1Q5VV42 579 aa17.04■□□□□ 0.32
PMS1-221ENST00000624204 PSMD14O00487 310 aa17.03■□□□□ 0.32
PMS1-221ENST00000624204 MEFVO15553 781 aaPredicted RBP17.03■□□□□ 0.32
PMS1-221ENST00000624204 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
PMS1-221ENST00000624204 CUL4BQ13620 913 aa17.03■□□□□ 0.32
PMS1-221ENST00000624204 RRAGBQ5VZM2 374 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms