RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ENTPD3O75355 529 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 CTDNEP1O95476 244 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 RASA1P20936 1047 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 NFIAQ12857 509 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 PPP2R5BQ15173 497 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 CATIPQ7Z7H3 387 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 MICU3Q86XE3 530 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 DGKHQ86XP1 1220 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 ZNF654Q8IZM8 581 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 FAM184AQ8NB25 1140 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 SLC44A5Q8NCS7 719 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 SYT17Q9BSW7 474 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 EHD4Q9H223 541 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 TDRD3Q9H7E2 651 aaKnown RBP8.17□□□□□ -1.1
CBWD3-219ENST00000622817 SERPINB13Q9UIV8 391 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 NID2Q14112 1375 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 CALM1P0DP23 149 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 CALM2P0DP24 149 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 CALM3P0DP25 149 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 ZSCAN22P10073 491 aaPredicted RBP8.17□□□□□ -1.1
CBWD3-219ENST00000622817 LMNB1P20700 586 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 CACNB3P54284 484 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 GABPAQ06546 454 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 FKBP1CQ5VVH2 108 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 RAB11FIP4Q86YS3 637 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 NEDD1Q8NHV4 660 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 ANKS1AQ92625 1134 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 DDX11Q96FC9 970 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 FAM198AQ9UFP1 575 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 ECM29Q5VYK3 1845 aa8.17□□□□□ -1.1
CBWD3-219ENST00000622817 MYO1BO43795 1136 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 DDAH1O94760 285 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 MCM4P33991 863 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 PRELPP51888 382 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 ZNF280AP59817 542 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-219ENST00000622817 TCP10Q12799 353 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 RTN1Q16799 776 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 FOXP4Q8IVH2 680 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-219ENST00000622817 ZSCAN29Q8IWY8 852 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-219ENST00000622817 ZFPM1Q8IX07 1006 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 FANCBQ8NB91 859 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 DPF2Q92785 391 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 ZBED3Q96IU2 234 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-219ENST00000622817 TRIM34Q9BYJ4 488 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 KAT14Q9H8E8 782 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 PI4KBQ9UBF8 816 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 ZNF70Q9UC06 446 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-219ENST00000622817 MTMR6Q9Y217 621 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 ATP6V1DQ9Y5K8 247 aa8.16□□□□□ -1.1
CBWD3-219ENST00000622817 COL2A1P02458 1487 aaPredicted RBP8.16□□□□□ -1.1
CBWD3-219ENST00000622817 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 VPS37CA5D8V6 355 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 GOLGA6L22H0YM25 854 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 NMT2O60551 498 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 BAG4O95429 457 aaKnown RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 RXRAP19793 462 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 CDC27P30260 824 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 ADD1P35611 737 aaKnown RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 GMPSP49915 693 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 NBR1Q14596 966 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 FOXD4L5Q5VV16 416 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 RCSD1Q6JBY9 416 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 CRACR2BQ8N4Y2 399 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 SLAIN1Q8ND83 568 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 RGS22Q8NE09 1264 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 NUP133Q8WUM0 1156 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 FOXD4L4Q8WXT5 416 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 ZFP91Q96JP5 570 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 MYL10Q9BUA6 226 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 MYOZ2Q9NPC6 264 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 IL17RBQ9NRM6 502 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 FAM217BQ9NTX9 383 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 ORC3Q9UBD5 711 aaPredicted RBP8.15□□□□□ -1.1
CBWD3-219ENST00000622817 ATRNL1Q5VV63 1379 aa8.15□□□□□ -1.1
CBWD3-219ENST00000622817 PLIN4Q96Q06 1357 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 DDTLA6NHG4 134 aaPredicted RBP8.15□□□□□ -1.11
CBWD3-219ENST00000622817 DDX11L8A8MPP1 907 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 H3BQV1 296 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 DTNBO60941 627 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 F13A1P00488 732 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.11
CBWD3-219ENST00000622817 IFNAR1P17181 557 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 PTMSP20962 102 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 TROAPQ12815 778 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 NTRK3Q16288 839 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 PPP4R3BQ5MIZ7 849 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 IFFO2Q5TF58 517 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 SH3BP5LQ7L8J4 393 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 CCDC144CPQ8IYA2 1237 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 EFCAB3Q8N7B9 438 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 FAM151AQ8WW52 585 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 CCDC17Q96LX7 622 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 MAP3K14Q99558 947 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 RBM28Q9NW13 759 aaKnown RBP8.15□□□□□ -1.11
CBWD3-219ENST00000622817 GJA3Q9Y6H8 435 aa8.15□□□□□ -1.11
CBWD3-219ENST00000622817 ZNF541Q9H0D2 1346 aa8.14□□□□□ -1.11
CBWD3-219ENST00000622817 STK36Q9NRP7 1315 aa8.14□□□□□ -1.11
CBWD3-219ENST00000622817 CLRN2A0PK11 232 aa8.14□□□□□ -1.11
CBWD3-219ENST00000622817 TCP10L2B9ZVM9 353 aa8.14□□□□□ -1.11
CBWD3-219ENST00000622817 WNT10BO00744 389 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms