RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 PDCLQ13371 301 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 RASGRP2Q7LDG7 609 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 COG1Q8WTW3 980 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 OSBP2Q969R2 916 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 SELENOOQ9BVL4 669 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 CAPS2Q9BXY5 557 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 MAP9Q49MG5 647 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 GBP6Q6ZN66 633 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 KIRREL3Q8IZU9 778 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 DONSONQ9NYP3 566 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 UTRNP46939 3433 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 WHAMMP3Q1A5X7 153 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 PANX2Q96RD6 677 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 CACNA1FO60840 1977 aa24.52■■□□□ 1.52
PCSK6-220ENST00000622483 SSBP05455 408 aaKnown RBP eCLIP24.51■■□□□ 1.51
PCSK6-220ENST00000622483 CD44P16070 742 aaKnown RBP24.51■■□□□ 1.51
PCSK6-220ENST00000622483 ARHGAP25P42331 645 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 ACTN3Q08043 901 aaPredicted RBP24.51■■□□□ 1.51
PCSK6-220ENST00000622483 RALYLQ86SE5 291 aaKnown RBP24.51■■□□□ 1.51
PCSK6-220ENST00000622483 SH2D3CQ8N5H7 860 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 SHTN1A0MZ66 631 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 GOLGA6BA6NDN3 693 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 USP14P54578 494 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 ANTXR2P58335 489 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 TRDNQ13061 729 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 PTF1AQ7RTS3 328 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 DNAJC10Q8IXB1 793 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 MAP3K14Q99558 947 aa24.51■■□□□ 1.51
PCSK6-220ENST00000622483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.51■■□□□ 1.512e-6■■■■□ 21.4
PCSK6-220ENST00000622483 A0A1B0GTH6 734 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 NBPF26B4DH59 902 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 KCNQ2O43526 872 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 C2orf54Q08AI8 447 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 EZH2Q15910 746 aaKnown RBP24.5■■□□□ 1.51
PCSK6-220ENST00000622483 NBPF14Q5TI25 921 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 NBPF10Q6P3W6 841 aaKnown RBP24.5■■□□□ 1.51
PCSK6-220ENST00000622483 CMTR1Q8N1G2 835 aaKnown RBP24.5■■□□□ 1.51
PCSK6-220ENST00000622483 NBPF15Q8N660 670 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 ENOX1Q8TC92 643 aaKnown RBP24.5■■□□□ 1.51
PCSK6-220ENST00000622483 PSMB7Q99436 277 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 KCNJ14Q9UNX9 436 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 ZC3H4Q9UPT8 1303 aaKnown RBP24.5■■□□□ 1.51
PCSK6-220ENST00000622483 MDM2Q00987 491 aaPredicted RBP24.5■■□□□ 1.51
PCSK6-220ENST00000622483 SND1Q7KZF4 910 aaKnown RBP eCLIP24.5■■□□□ 1.512e-6■■■■□ 19.3
PCSK6-220ENST00000622483 DSCC1Q9BVC3 393 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 NDUFAB1O14561 156 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 NEXNQ0ZGT2 675 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 INCENPQ9NQS7 918 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 DDX21Q9NR30 783 aaKnown RBP eCLIP24.5■■□□□ 1.51
PCSK6-220ENST00000622483 OVOS2A0A0G2JMS6 1433 aa24.5■■□□□ 1.51
PCSK6-220ENST00000622483 NEURL1BA8MQ27 555 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 GCKRQ14397 625 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 RNF187Q5TA31 235 aaPredicted RBP24.49■■□□□ 1.51
PCSK6-220ENST00000622483 GIMAP7Q8NHV1 300 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 MAPK8IP1Q9UQF2 711 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 BTBD18B2RXH4 712 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 FGAP02671 866 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 SLC7A5Q01650 507 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 PPARAQ07869 468 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 PPP2R5AQ15172 486 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 CTCFLQ8NI51 663 aaPredicted RBP24.49■■□□□ 1.51
PCSK6-220ENST00000622483 LAMA4Q16363 1823 aa24.49■■□□□ 1.51
PCSK6-220ENST00000622483 PDE6BP35913 854 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 HDAC7Q8WUI4 952 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 NCAPD2Q15021 1401 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 EEF2KMTQ96G04 330 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 DDX58O95786 925 aaKnown RBP24.48■■□□□ 1.51
PCSK6-220ENST00000622483 AMPD2Q01433 879 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 ZMYM1Q5SVZ6 1142 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 WDR93Q6P2C0 686 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 KRI1Q8N9T8 703 aaKnown RBP24.48■■□□□ 1.51
PCSK6-220ENST00000622483 ZNF594Q96JF6 807 aaPredicted RBP24.48■■□□□ 1.51
PCSK6-220ENST00000622483 SLC24A3Q9HC58 644 aa24.48■■□□□ 1.51
PCSK6-220ENST00000622483 AARSP49588 968 aaKnown RBP eCLIP24.47■■□□□ 1.51
PCSK6-220ENST00000622483 METAP2P50579 478 aaKnown RBP eCLIP24.47■■□□□ 1.51
PCSK6-220ENST00000622483 SH3TC1Q8TE82 1336 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 N4BP3O15049 544 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 SETQ01105 290 aaPredicted RBP24.47■■□□□ 1.51
PCSK6-220ENST00000622483 DDB1Q16531 1140 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 ANKRD13DQ6ZTN6 518 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 ANKRD18AQ8IVF6 992 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 OTUD6BQ8N6M0 293 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 MLKLQ8NB16 471 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 GNL3LQ9NVN8 582 aaKnown RBP24.47■■□□□ 1.51
PCSK6-220ENST00000622483 BABAM1Q9NWV8 329 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 TAB2Q9NYJ8 693 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 TTF2Q9UNY4 1162 aaKnown RBP24.47■■□□□ 1.51
PCSK6-220ENST00000622483 LTBP4Q8N2S1 1624 aa24.47■■□□□ 1.51
PCSK6-220ENST00000622483 PPP6R2O75170 966 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 APTXQ7Z2E3 356 aaKnown RBP24.46■■□□□ 1.51
PCSK6-220ENST00000622483 ARL8AQ96BM9 186 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 SMARCAL1Q9NZC9 954 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 IFIT1P09914 478 aaKnown RBP24.46■■□□□ 1.51
PCSK6-220ENST00000622483 KRT9P35527 623 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 MORC3Q14149 939 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 IMMTQ16891 758 aaKnown RBP24.46■■□□□ 1.51
PCSK6-220ENST00000622483 KCTD19Q17RG1 926 aaPredicted RBP24.46■■□□□ 1.51
PCSK6-220ENST00000622483 LMBR1LQ6UX01 489 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 CEP57Q86XR8 500 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 SLC26A6Q9BXS9 759 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms