RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 MS4A1P11836 297 aa11.31□□□□□ -0.6
TARDBP-227ENST00000622057 XRCC5P13010 732 aaKnown RBP11.31□□□□□ -0.6
TARDBP-227ENST00000622057 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
TARDBP-227ENST00000622057 CACNB2Q08289 660 aaPredicted RBP11.31□□□□□ -0.6
TARDBP-227ENST00000622057 POTEEQ6S8J3 1075 aa11.31□□□□□ -0.6
TARDBP-227ENST00000622057 CATSPERGQ6ZRH7 1159 aa11.31□□□□□ -0.6
TARDBP-227ENST00000622057 C7orf61Q8IZ16 206 aa11.31□□□□□ -0.6
TARDBP-227ENST00000622057 RIOK1Q9BRS2 568 aaKnown RBP11.31□□□□□ -0.6
TARDBP-227ENST00000622057 EHD4Q9H223 541 aa11.31□□□□□ -0.6
TARDBP-227ENST00000622057 C11orf49Q9H6J7 331 aa11.31□□□□□ -0.6
TARDBP-227ENST00000622057 COG6Q9Y2V7 657 aa11.31□□□□□ -0.6
TARDBP-227ENST00000622057 DOCK3Q8IZD9 2030 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 GOLIM4O00461 696 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 PDE6AP16499 860 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 ZKSCAN1P17029 563 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-227ENST00000622057 RGS2P41220 211 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 CCL14Q16627 93 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 TMED8Q6PL24 325 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-227ENST00000622057 RPAP2Q8IXW5 612 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-227ENST00000622057 TRMT44Q8IYL2 757 aaKnown RBP11.3□□□□□ -0.6
TARDBP-227ENST00000622057 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 KIF1BPQ96EK5 621 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 EDC3Q96F86 508 aaKnown RBP11.3□□□□□ -0.6
TARDBP-227ENST00000622057 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 CRNKL1Q9BZJ0 848 aaKnown RBP11.3□□□□□ -0.6
TARDBP-227ENST00000622057 KIAA1683Q9H0B3 1180 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 PRO3102Q9H379 93 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 MCM9Q9NXL9 1143 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 OGDHLQ9ULD0 1010 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 ZMYND8Q9ULU4 1186 aaPredicted RBP11.3□□□□□ -0.6
TARDBP-227ENST00000622057 RABGAP1Q9Y3P9 1069 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 ZNF532Q9HCE3 1301 aa11.3□□□□□ -0.6
TARDBP-227ENST00000622057 LOC285556D6RIA3 1793 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 HMMRO75330 724 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 CNMDO75829 334 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 GLRX3O76003 335 aaKnown RBP11.29□□□□□ -0.6
TARDBP-227ENST00000622057 SYN1P17600 705 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 VCAM1P19320 739 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-227ENST00000622057 GUCY1A2P33402 732 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 SHMT1P34896 483 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 MNX1P50219 401 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-227ENST00000622057 CCNA1P78396 465 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 EVX2Q03828 476 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 MAP2K5Q13163 448 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 SEPT2Q15019 361 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 MORN1Q5T089 497 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 MAP3K21Q5TCX8 1036 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 USP6NLQ92738 828 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 BOLA2Q9H3K6 86 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 RPAP3Q9H6T3 665 aaPredicted RBP11.29□□□□□ -0.6
TARDBP-227ENST00000622057 ATAD5Q96QE3 1844 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 ZBED9Q6R2W3 1325 aa11.29□□□□□ -0.6
TARDBP-227ENST00000622057 SIPA1L1O43166 1804 aa11.28□□□□□ -0.6
TARDBP-227ENST00000622057 CYP2D6P10635 497 aa11.28□□□□□ -0.6
TARDBP-227ENST00000622057 PTPREP23469 700 aa11.28□□□□□ -0.6
TARDBP-227ENST00000622057 LCORLQ8N3X6 602 aa11.28□□□□□ -0.6
TARDBP-227ENST00000622057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.28□□□□□ -0.6
TARDBP-227ENST00000622057 ARMT1Q9H993 441 aa11.28□□□□□ -0.6
TARDBP-227ENST00000622057 BTBD7Q9P203 1132 aa11.28□□□□□ -0.6
TARDBP-227ENST00000622057 DDX19BQ9UMR2 479 aa11.28□□□□□ -0.6
TARDBP-227ENST00000622057 A0A1W2PRG0 241 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 PRKAB2O43741 272 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 RAB11FIP3O75154 756 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 CNGA1P29973 690 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 GABPAQ06546 454 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 SLFNL1Q499Z3 407 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 MFSD14CQ5VZR4 134 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 SIRT2Q8IXJ6 389 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 DYNLL2Q96FJ2 89 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 APBA2Q99767 749 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 DCP1AQ9NPI6 582 aaPredicted RBP11.27□□□□□ -0.61
TARDBP-227ENST00000622057 ZBTB40Q9NUA8 1239 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 HOXC10Q9NYD6 342 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 IVNS1ABPQ9Y6Y0 642 aa11.27□□□□□ -0.61
TARDBP-227ENST00000622057 MYO5AQ9Y4I1 1855 aaKnown RBP11.27□□□□□ -0.61
TARDBP-227ENST00000622057 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 A0A1W2PPC1 479 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 TCRBV5S4A2TA0A5A2 114 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 SLC15A5A6NIM6 579 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-227ENST00000622057 COG2Q14746 738 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 LHX8Q68G74 356 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 SAMD1Q6SPF0 538 aaPredicted RBP11.26□□□□□ -0.61
TARDBP-227ENST00000622057 DPP9Q86TI2 863 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 SLC44A5Q8NCS7 719 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 NPLOC4Q8TAT6 608 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 LRCH3Q96II8 777 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 GDF15Q99988 308 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 TANGO6Q9C0B7 1094 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 PAG1Q9NWQ8 432 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 FLRT1Q9NZU1 646 aa11.26□□□□□ -0.61
TARDBP-227ENST00000622057 SOX1O00570 391 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-227ENST00000622057 CYP2C19P33261 490 aa11.25□□□□□ -0.61
TARDBP-227ENST00000622057 BMP8BP34820 402 aa11.25□□□□□ -0.61
TARDBP-227ENST00000622057 ADD2P35612 726 aa11.25□□□□□ -0.61
TARDBP-227ENST00000622057 LBX2Q6XYB7 198 aa11.25□□□□□ -0.61
TARDBP-227ENST00000622057 SENP6Q9GZR1 1112 aaPredicted RBP11.25□□□□□ -0.61
TARDBP-227ENST00000622057 CHMP4BQ9H444 224 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms