RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 ALDH1A1P00352 501 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 GJA5P36382 358 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 TFAP4Q01664 338 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 ATP2B2Q01814 1243 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 NECTIN1Q15223 517 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 TMEM179Q6ZVK1 233 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 ERO1BQ86YB8 467 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 TRIM75PA6NK02 468 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 USP17L5A8MUK1 530 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 E7EWF7 191 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 TBC1D8O95759 1140 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 GUCY1A2P33402 732 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 INHBEP58166 350 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 NOM1Q5C9Z4 860 aaKnown RBP15.96■□□□□ 0.15
MUC1-229ENST00000620770 STOX1Q6ZVD7 989 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 RALYLQ86SE5 291 aaKnown RBP15.96■□□□□ 0.15
MUC1-229ENST00000620770 NKX2-3Q8TAU0 364 aa15.96■□□□□ 0.15
MUC1-229ENST00000620770 KDM4AO75164 1064 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 PCP11498 1178 aaKnown RBP15.95■□□□□ 0.14
MUC1-229ENST00000620770 MCCP23508 829 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 ICA1Q05084 483 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 TRDNQ13061 729 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 ZNF296Q8WUU4 475 aaPredicted RBP15.95■□□□□ 0.14
MUC1-229ENST00000620770 ESR2Q92731 530 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 FEZ1Q99689 392 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 CFHR5Q9BXR6 569 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 USP26Q9BXU7 913 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 KRT23Q9C075 422 aa15.95■□□□□ 0.14
MUC1-229ENST00000620770 IRF6O14896 467 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 NMT2O60551 498 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 EIF5BO60841 1220 aaKnown RBP15.94■□□□□ 0.14
MUC1-229ENST00000620770 FGRP09769 529 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 ZKSCAN1P17029 563 aaPredicted RBP15.94■□□□□ 0.14
MUC1-229ENST00000620770 HSPA4P34932 840 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 PPATQ06203 517 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 SPP2Q13103 211 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 PPIL2Q13356 520 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 ZYXQ15942 572 aaKnown RBP15.94■□□□□ 0.14
MUC1-229ENST00000620770 RASEFQ8IZ41 740 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 ZKSCAN3Q9BRR0 538 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.94■□□□□ 0.14
MUC1-229ENST00000620770 CNNM2Q9H8M5 875 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 AS3MTQ9HBK9 375 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 GINM1Q9NU53 330 aa15.94■□□□□ 0.14
MUC1-229ENST00000620770 GPR25O00155 361 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 MTMR2Q13614 643 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 PKN2Q16513 984 aaKnown RBP15.93■□□□□ 0.14
MUC1-229ENST00000620770 IFNL1Q8IU54 200 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 ZNF280CQ8ND82 737 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 NEDD1Q8NHV4 660 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 NCOA7Q8NI08 942 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 ACER1Q8TDN7 264 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 CEP95Q96GE4 821 aa15.93■□□□□ 0.14
MUC1-229ENST00000620770 PLIN4Q96Q06 1357 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 RAD21O60216 631 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 FKTNO75072 461 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 EEF2P13639 858 aaKnown RBP15.92■□□□□ 0.14
MUC1-229ENST00000620770 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 CYB5R4Q7L1T6 521 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 CHST3Q7LGC8 479 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 KANSL2Q9H9L4 492 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 ARHGEF10LQ9HCE6 1279 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 AFG3L2Q9Y4W6 797 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 SNX14Q9Y5W7 946 aa15.92■□□□□ 0.14
MUC1-229ENST00000620770 IGKV6D-41A0A0C4DH26 115 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 EPB41L2O43491 1005 aaKnown RBP15.91■□□□□ 0.14
MUC1-229ENST00000620770 HMGCS2P54868 508 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 MLLT1Q03111 559 aaPredicted RBP15.91■□□□□ 0.14
MUC1-229ENST00000620770 SNAPC2Q13487 334 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 GADL1Q6ZQY3 521 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 LRRC47Q8N1G4 583 aaKnown RBP15.91■□□□□ 0.14
MUC1-229ENST00000620770 JAKMIP1Q96N16 626 aaKnown RBP15.91■□□□□ 0.14
MUC1-229ENST00000620770 UBAC1Q9BSL1 405 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 WDR18Q9BV38 432 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 IL17RBQ9NRM6 502 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 ZSWIM5Q9P217 1185 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 CLIP2Q9UDT6 1046 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 STX8Q9UNK0 236 aa15.91■□□□□ 0.14
MUC1-229ENST00000620770 GREB1LQ9C091 1923 aaPredicted RBP15.9■□□□□ 0.14
MUC1-229ENST00000620770 PHIPQ8WWQ0 1821 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 CCL15-CCL14A0A0B4J2E2 113 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 A0A1W2PRG0 241 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 USP17L10C9JJH3 530 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 IGF2BP3O00425 579 aaKnown RBP eCLIP15.9■□□□□ 0.14
MUC1-229ENST00000620770 RGS19P49795 217 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 GTF2A2P52657 109 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 COL9A3Q14050 684 aaPredicted RBP15.9■□□□□ 0.14
MUC1-229ENST00000620770 KRT32Q14532 448 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 CCL15Q16663 113 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 ADCK5Q3MIX3 580 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 IQCA1Q86XH1 822 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 MB21D2Q8IYB1 491 aaPredicted RBP15.9■□□□□ 0.14
MUC1-229ENST00000620770 CHMP4CQ96CF2 233 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 TBC1D2Q9BYX2 928 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 MTMR4Q9NYA4 1195 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 KCNH4Q9UQ05 1017 aa15.9■□□□□ 0.14
MUC1-229ENST00000620770 MTMR7Q9Y216 660 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms