RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 GOLGA8KD6RF30 607 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 TPD52L2O43399 206 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 PDIA3P30101 505 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 RNASE9P60153 205 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 EIF4A1P60842 406 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 TCERG1LQ5VWI1 586 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 ZNF804AQ7Z570 1209 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 APPBP2Q92624 585 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 FOXP1Q9H334 677 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 SAR1BQ9Y6B6 198 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 VWA3AA6NCI4 1184 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CLCN6P51797 869 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 HERC4Q5GLZ8 1057 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 CCDC110Q8TBZ0 833 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SUCLG2Q96I99 432 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 NYXQ9GZU5 481 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SH3BP1Q9Y3L3 701 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SAMM50Q9Y512 469 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CALCOCO2Q13137 446 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 ADCK5Q3MIX3 580 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 BEND3Q5T5X7 828 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CSGALNACT2Q8N6G5 542 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.39□□□□□ -1.87
LPP-221ENST00000618621 KIAA0232Q92628 1395 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 DEXIO95424 95 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 PARP1P09874 1014 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 MAP2K2P36507 400 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 DENND2CQ68D51 928 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 RINLQ6ZS11 566 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 HS6ST3Q8IZP7 471 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 HELBQ8NG08 1087 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 WDR66Q8TBY9 1149 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 ANAPC4Q9UJX5 808 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CCDC170Q8IYT3 715 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 EXOC4Q96A65 974 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 GTPBP6O43824 516 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 SNX16P57768 344 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 PARP10Q53GL7 1025 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 STX10O60499 249 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 BCRP11274 1271 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 PLA2G4DQ86XP0 818 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 NSUN7Q8NE18 718 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 SMC6Q96SB8 1091 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 RTL1A6NKG5 1358 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 ARID5AQ03989 594 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SLC39A14Q15043 492 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 FAM71BQ8TC56 605 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SEPT8Q92599 483 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 KCNF1Q9H3M0 494 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 ARID4AP29374 1257 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 TRAPPC10P48553 1259 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 PLIN2Q99541 437 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CDCA7Q9BWT1 371 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 CEP104O60308 925 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 PDE8AO60658 829 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CAPS2Q9BXY5 557 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 RGS16O15492 202 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 PPP6R2O75170 966 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 MAGEA1P43355 309 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 NDUFA8P51970 172 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 PAK2Q13177 524 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 TTC38Q5R3I4 469 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 KRT40Q6A162 431 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 STMN2Q93045 179 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 ZNF335Q9H4Z2 1342 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 A0A0D9SFI3 127 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 FLOT1O75955 427 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SLC8A1P32418 973 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 CWF19L2Q2TBE0 894 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 PIK3AP1Q6ZUJ8 805 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SMARCC2Q8TAQ2 1214 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 MAIP1Q8WWC4 291 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 MYCBPQ99417 103 aaPredicted RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 SLF1Q9BQI6 1058 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 JRKLQ9Y4A0 524 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SBNO2Q9Y2G9 1366 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 GAS8O95995 478 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 MPHOSPH6Q99547 160 aaKnown RBP3.39□□□□□ -1.87
LPP-221ENST00000618621 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.39□□□□□ -1.87
LPP-221ENST00000618621 SUGT1Q9Y2Z0 365 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 PCDHA5Q9Y5H7 936 aa3.39□□□□□ -1.87
LPP-221ENST00000618621 SMIM23A6NLE4 172 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 ERVV-2B6SEH9 535 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 RIMBP2O15034 1052 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 CALCRLQ16602 461 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 FAM89AQ96GI7 184 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 TAB2Q9NYJ8 693 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 CEP290O15078 2479 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SUPT6HQ7KZ85 1726 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 TLDC2A0PJX2 215 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 TTC36A6NLP5 189 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 GPAA1O43292 621 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 TRIM37O94972 964 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SETSIPP0DME0 302 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 EEF2P13639 858 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 HIBADHP31937 336 aaKnown RBP3.38□□□□□ -1.87
LPP-221ENST00000618621 ST5P78524 1137 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 SLC4A8Q2Y0W8 1093 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 DNAJC10Q8IXB1 793 aa3.38□□□□□ -1.87
LPP-221ENST00000618621 KBTBD3Q8NAB2 608 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms