RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 TSKSQ9UJT2 592 aa20.35■□□□□ 0.85
SBDS-205ENST00000617799 U3KPZ7 1027 aaPredicted RBP20.35■□□□□ 0.85
SBDS-205ENST00000617799 PTPRFP10586 1907 aa20.35■□□□□ 0.85
SBDS-205ENST00000617799 USP17L10C9JJH3 530 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 RANBP6O60518 1105 aaKnown RBP20.34■□□□□ 0.85
SBDS-205ENST00000617799 REC8O95072 547 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 TSPY3P0CV98 308 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 TSPY8P0CW00 308 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 GUCY1A2P33402 732 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 FAM47AQ5JRC9 791 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 MFSD6Q6ZSS7 791 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 PTPN18Q99952 460 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 RNF41Q9H4P4 317 aaPredicted RBP20.34■□□□□ 0.85
SBDS-205ENST00000617799 ARHGEF10LQ9HCE6 1279 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 INCENPQ9NQS7 918 aa20.34■□□□□ 0.85
SBDS-205ENST00000617799 TSPY2A6NKD2 308 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 BTBD19C9JJ37 291 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 BACE1P56817 501 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 TFAP4Q01664 338 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 AKNAD1Q5T1N1 836 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 TBC1D10CQ8IV04 446 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 FAM43AQ8N2R8 423 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 KANSL2Q9H9L4 492 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 SAGE1Q9NXZ1 904 aa20.33■□□□□ 0.85
SBDS-205ENST00000617799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.33■□□□□ 0.85
SBDS-205ENST00000617799 LOC285556D6RIA3 1793 aa20.32■□□□□ 0.84
SBDS-205ENST00000617799 C19orf81C9J6K1 198 aa20.32■□□□□ 0.84
SBDS-205ENST00000617799 FOXN1O15353 648 aa20.32■□□□□ 0.84
SBDS-205ENST00000617799 ACER1Q8TDN7 264 aa20.32■□□□□ 0.84
SBDS-205ENST00000617799 STAG1Q8WVM7 1258 aa20.32■□□□□ 0.84
SBDS-205ENST00000617799 SH2D4AQ9H788 454 aa20.32■□□□□ 0.84
SBDS-205ENST00000617799 RBM8AQ9Y5S9 174 aaKnown RBP20.32■□□□□ 0.84
SBDS-205ENST00000617799 PDHXO00330 501 aa20.31■□□□□ 0.84
SBDS-205ENST00000617799 ORC4O43929 436 aa20.31■□□□□ 0.84
SBDS-205ENST00000617799 PCP11498 1178 aaKnown RBP20.31■□□□□ 0.84
SBDS-205ENST00000617799 CTCFP49711 727 aaPredicted RBP20.31■□□□□ 0.84
SBDS-205ENST00000617799 USP14P54578 494 aa20.31■□□□□ 0.84
SBDS-205ENST00000617799 DGKZQ13574 1117 aa20.31■□□□□ 0.84
SBDS-205ENST00000617799 TAF1CQ15572 869 aaPredicted RBP20.31■□□□□ 0.84
SBDS-205ENST00000617799 USP17L2Q6R6M4 530 aa20.31■□□□□ 0.84
SBDS-205ENST00000617799 ANKRD23Q86SG2 305 aa20.31■□□□□ 0.84
SBDS-205ENST00000617799 PROCA1Q8NCQ7 364 aaPredicted RBP20.31■□□□□ 0.84
SBDS-205ENST00000617799 NBPF3Q9H094 633 aa20.31■□□□□ 0.84
SBDS-205ENST00000617799 GREB1LQ9C091 1923 aaPredicted RBP20.3■□□□□ 0.84
SBDS-205ENST00000617799 RAD21O60216 631 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 TBC1D8O95759 1140 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 EEF2P13639 858 aaKnown RBP20.3■□□□□ 0.84
SBDS-205ENST00000617799 NT5C2P49902 561 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 MOGSQ13724 837 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 MAP4K1Q92918 833 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 LSG1Q9H089 658 aaKnown RBP20.3■□□□□ 0.84
SBDS-205ENST00000617799 KIAA1683Q9H0B3 1180 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 AGTPBP1Q9UPW5 1226 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 TACC3Q9Y6A5 838 aa20.3■□□□□ 0.84
SBDS-205ENST00000617799 NEDD4P46934 1319 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 PABPC4Q13310 644 aaKnown RBP eCLIP20.29■□□□□ 0.84
SBDS-205ENST00000617799 CRHR2Q13324 411 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 SH3D19Q5HYK7 790 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 TREML2Q5T2D2 321 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 NEDD1Q8NHV4 660 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 ESR2Q92731 530 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 CEP95Q96GE4 821 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.29■□□□□ 0.84
SBDS-205ENST00000617799 ZFYVE28Q9HCC9 887 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 ZCCHC17Q9NP64 241 aaKnown RBP20.29■□□□□ 0.84
SBDS-205ENST00000617799 PLIN4Q96Q06 1357 aa20.29■□□□□ 0.84
SBDS-205ENST00000617799 A0A1W2PRG0 241 aa20.28■□□□□ 0.84
SBDS-205ENST00000617799 FGRP09769 529 aa20.28■□□□□ 0.84
SBDS-205ENST00000617799 GPAT2Q6NUI2 795 aa20.28■□□□□ 0.84
SBDS-205ENST00000617799 PARK7Q99497 189 aaKnown RBP20.28■□□□□ 0.84
SBDS-205ENST00000617799 EMILIN3Q9NT22 766 aa20.28■□□□□ 0.84
SBDS-205ENST00000617799 CYP21A2P08686 494 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 HSPA8P11142 646 aaKnown RBP20.27■□□□□ 0.84
SBDS-205ENST00000617799 TRDNQ13061 729 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 PPP4R3BQ5MIZ7 849 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 KRT23Q9C075 422 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 CNNM2Q9H8M5 875 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 GOPCQ9HD26 462 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 MTMR4Q9NYA4 1195 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 CLIP2Q9UDT6 1046 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 PNMA3Q9UL41 463 aa20.27■□□□□ 0.84
SBDS-205ENST00000617799 IGKV6D-41A0A0C4DH26 115 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 B4E1Z4 1266 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 TTLL1O95922 423 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 LBX1P52954 281 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 IRX3P78415 501 aaPredicted RBP20.26■□□□□ 0.83
SBDS-205ENST00000617799 SIAH1Q8IUQ4 282 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 SMCR8Q8TEV9 937 aaPredicted RBP20.26■□□□□ 0.83
SBDS-205ENST00000617799 NYAP2Q9P242 653 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 STX8Q9UNK0 236 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 SLC45A1Q9Y2W3 748 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 TMX2Q9Y320 296 aa20.26■□□□□ 0.83
SBDS-205ENST00000617799 MYH4Q9Y623 1939 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 NMT2O60551 498 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 KDM4AO75164 1064 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 CYP2C8P10632 490 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 VCAM1P19320 739 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 OSBPP22059 807 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
SBDS-205ENST00000617799 RALYLQ86SE5 291 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms