RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 C8orf34Q49A92 452 aa6.87□□□□□ -1.31
CUL3-216ENST00000617432 DBX2Q6ZNG2 339 aa6.87□□□□□ -1.31
CUL3-216ENST00000617432 RELTQ969Z4 430 aa6.87□□□□□ -1.31
CUL3-216ENST00000617432 CORO1BQ9BR76 489 aa6.87□□□□□ -1.31
CUL3-216ENST00000617432 CLEC4MQ9H2X3 399 aaPredicted RBP6.87□□□□□ -1.31
CUL3-216ENST00000617432 TMEM94Q12767 1356 aa6.87□□□□□ -1.31
CUL3-216ENST00000617432 PLEKHG1Q9ULL1 1385 aa6.87□□□□□ -1.31
CUL3-216ENST00000617432 PTPRUQ92729 1446 aa6.87□□□□□ -1.31
CUL3-216ENST00000617432 HOXA5P20719 270 aa6.86□□□□□ -1.31
CUL3-216ENST00000617432 CDCA8Q53HL2 280 aa6.86□□□□□ -1.31
CUL3-216ENST00000617432 FYB2Q5VWT5 728 aa6.86□□□□□ -1.31
CUL3-216ENST00000617432 DDX54Q8TDD1 881 aaKnown RBP6.86□□□□□ -1.31
CUL3-216ENST00000617432 TNKS2Q9H2K2 1166 aa6.86□□□□□ -1.31
CUL3-216ENST00000617432 PPP1R15AO75807 674 aaPredicted RBP6.85□□□□□ -1.31
CUL3-216ENST00000617432 TMEM253P0C7T8 217 aa6.85□□□□□ -1.31
CUL3-216ENST00000617432 DNM1Q05193 864 aaKnown RBP6.85□□□□□ -1.31
CUL3-216ENST00000617432 ZP2Q05996 745 aa6.85□□□□□ -1.31
CUL3-216ENST00000617432 CIAPIN1Q6FI81 312 aa6.85□□□□□ -1.31
CUL3-216ENST00000617432 ASB11Q8WXH4 323 aa6.85□□□□□ -1.31
CUL3-216ENST00000617432 C20orf173Q96LM9 149 aa6.85□□□□□ -1.31
CUL3-216ENST00000617432 PPP1R9AQ9ULJ8 1098 aa6.85□□□□□ -1.31
CUL3-216ENST00000617432 CHD2O14647 1828 aaKnown RBP6.85□□□□□ -1.31
CUL3-216ENST00000617432 A6NHS1 94 aa6.84□□□□□ -1.31
CUL3-216ENST00000617432 PHACTR2O75167 634 aa6.84□□□□□ -1.31
CUL3-216ENST00000617432 PDGFAP04085 211 aa6.84□□□□□ -1.31
CUL3-216ENST00000617432 KCNA6P17658 529 aa6.84□□□□□ -1.31
CUL3-216ENST00000617432 TMEM67Q5HYA8 995 aa6.84□□□□□ -1.31
CUL3-216ENST00000617432 PEAR1Q5VY43 1037 aaPredicted RBP6.84□□□□□ -1.31
CUL3-216ENST00000617432 WDR18Q9BV38 432 aa6.84□□□□□ -1.31
CUL3-216ENST00000617432 SETD1AO15047 1707 aaKnown RBP6.84□□□□□ -1.31
CUL3-216ENST00000617432 SETBP1Q9Y6X0 1596 aa6.84□□□□□ -1.31
CUL3-216ENST00000617432 NKTRP30414 1462 aaKnown RBP6.84□□□□□ -1.31
CUL3-216ENST00000617432 METP08581 1390 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 DISP3Q9P2K9 1392 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 A0A096LPE4 126 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 A0A1W2PPZ6 126 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 METTL12A8MUP2 240 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 IKZF1Q13422 519 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 KCNA10Q16322 511 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 ZNF326Q5BKZ1 582 aaKnown RBP6.84□□□□□ -1.32
CUL3-216ENST00000617432 CFAP70Q5T0N1 1121 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 KIRREL1Q96J84 757 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 TRIM56Q9BRZ2 755 aaKnown RBP6.84□□□□□ -1.32
CUL3-216ENST00000617432 PIDD1Q9HB75 910 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 CD320Q9NPF0 282 aa6.84□□□□□ -1.32
CUL3-216ENST00000617432 KIF1BO60333 1816 aa6.83□□□□□ -1.32
CUL3-216ENST00000617432 XRN1Q8IZH2 1706 aaKnown RBP6.83□□□□□ -1.32
CUL3-216ENST00000617432 DIP2AQ14689 1571 aa6.83□□□□□ -1.32
CUL3-216ENST00000617432 MED1Q15648 1581 aaPredicted RBP6.83□□□□□ -1.32
CUL3-216ENST00000617432 RAB3GAP2Q9H2M9 1393 aa6.83□□□□□ -1.32
CUL3-216ENST00000617432 TOM1O60784 492 aa6.83□□□□□ -1.32
CUL3-216ENST00000617432 LEFTY1O75610 366 aa6.83□□□□□ -1.32
CUL3-216ENST00000617432 ECEL1O95672 775 aa6.83□□□□□ -1.32
CUL3-216ENST00000617432 MZF1P28698 734 aaPredicted RBP6.83□□□□□ -1.32
CUL3-216ENST00000617432 ELOAQ14241 798 aaKnown RBP6.83□□□□□ -1.32
CUL3-216ENST00000617432 DUSP23Q9BVJ7 150 aa6.83□□□□□ -1.32
CUL3-216ENST00000617432 ROBO1Q9Y6N7 1651 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 SETD5Q9C0A6 1442 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 PPLO60437 1756 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 TNFRSF21O75509 655 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 SNX29Q8TEQ0 813 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 MPHOSPH9Q99550 1183 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 ATXN3LQ9H3M9 355 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 LATS2Q9NRM7 1088 aa6.82□□□□□ -1.32
CUL3-216ENST00000617432 ASXL1Q8IXJ9 1541 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 TMPRSS2O15393 492 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 PDE3AQ14432 1141 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 CYFIP1Q7L576 1253 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 SMYD4Q8IYR2 804 aaPredicted RBP6.81□□□□□ -1.32
CUL3-216ENST00000617432 ZMIZ1Q9ULJ6 1067 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 TBX22Q9Y458 520 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 NALCNQ8IZF0 1738 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.81□□□□□ -1.32
CUL3-216ENST00000617432 IFT172Q9UG01 1749 aa6.81□□□□□ -1.32
CUL3-216ENST00000617432 SPATA31E1Q6ZUB1 1445 aa6.8□□□□□ -1.32
CUL3-216ENST00000617432 MED14OSP0DP75 135 aa6.8□□□□□ -1.32
CUL3-216ENST00000617432 ITIH2P19823 946 aa6.8□□□□□ -1.32
CUL3-216ENST00000617432 ATG14Q6ZNE5 492 aa6.8□□□□□ -1.32
CUL3-216ENST00000617432 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.8□□□□□ -1.32
CUL3-216ENST00000617432 NSUN3Q9H649 340 aaKnown RBP6.8□□□□□ -1.32
CUL3-216ENST00000617432 AMOTL2Q9Y2J4 779 aa6.8□□□□□ -1.32
CUL3-216ENST00000617432 ADGRF5Q8IZF2 1346 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 TCAF2A6NFQ2 919 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 NOM1Q5C9Z4 860 aaKnown RBP6.79□□□□□ -1.32
CUL3-216ENST00000617432 CCNJLQ8IV13 435 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 FANCD2OSQ96PS1 177 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 DIRC2Q96SL1 478 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 PCOLCE2Q9UKZ9 415 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 CCDC144AA2RUR9 1427 aa6.79□□□□□ -1.32
CUL3-216ENST00000617432 B3GALT4O96024 378 aa6.78□□□□□ -1.32
CUL3-216ENST00000617432 SLFN14P0C7P3 912 aa6.78□□□□□ -1.32
CUL3-216ENST00000617432 PARD6AQ9NPB6 346 aa6.78□□□□□ -1.32
CUL3-216ENST00000617432 MSH6P52701 1360 aa6.78□□□□□ -1.32
CUL3-216ENST00000617432 ROBO2Q9HCK4 1378 aa6.78□□□□□ -1.32
CUL3-216ENST00000617432 COL16A1Q07092 1604 aaPredicted RBP6.77□□□□□ -1.32
CUL3-216ENST00000617432 FOXD2O60548 495 aaPredicted RBP6.77□□□□□ -1.33
CUL3-216ENST00000617432 ID3Q02535 119 aa6.77□□□□□ -1.33
CUL3-216ENST00000617432 SPRED3Q2MJR0 410 aa6.77□□□□□ -1.33
CUL3-216ENST00000617432 FAM135BQ49AJ0 1406 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms