RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 ZSCAN10Q96SZ4 725 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 TMX1Q9H3N1 280 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 KINO60870 393 aaKnown RBP13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 ADALQ6DHV7 355 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 SH3RF3Q8TEJ3 882 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 DYNLL2Q96FJ2 89 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 STK32BQ9NY57 414 aa13.11□□□□□ -0.31
PCDHGA9-202ENST00000616887 XDHP47989 1333 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 ZNF165P49910 485 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 TMEM132AQ24JP5 1023 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 SPECC1Q5M775 1068 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 MCM9Q9NXL9 1143 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 FAM205CA6NFA0 338 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 YEATS4O95619 227 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 FAM193AP78312 1265 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 CRY2Q49AN0 593 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 IFIT1BQ5T764 474 aaKnown RBP13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 DIS3L2Q8IYB7 885 aaKnown RBP13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 CRACR2BQ8N4Y2 399 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 KCNG4Q8TDN1 519 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 EFCC1Q9HA90 598 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 ZNF446Q9NWS9 450 aa13.1□□□□□ -0.31
PCDHGA9-202ENST00000616887 POLRMTO00411 1230 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 LDHBP07195 334 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 GRIN1Q05586 938 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 TRIM29Q14134 588 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 TDRD7Q8NHU6 1098 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 VPS54Q9P1Q0 977 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 PFKFB1P16118 471 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 ATP2B1P20020 1258 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 TOB1P50616 345 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 PTPAQ15257 358 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 POLLQ9UGP5 575 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 NID2Q14112 1375 aa13.09□□□□□ -0.31
PCDHGA9-202ENST00000616887 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.31
PCDHGA9-202ENST00000616887 STK36Q9NRP7 1315 aa13.08□□□□□ -0.31
PCDHGA9-202ENST00000616887 MMP1P03956 469 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 ST5P78524 1137 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 PDS5AQ29RF7 1337 aaKnown RBP13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 BIN1O00499 593 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 TROAPQ12815 778 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 SLC39A14Q15043 492 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 EARS2Q5JPH6 523 aaKnown RBP13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 RASGRP2Q7LDG7 609 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 TRIM22Q8IYM9 498 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 SDF4Q9BRK5 362 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 SAP30BPQ9UHR5 308 aaKnown RBP13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 LEMD3Q9Y2U8 911 aa13.08□□□□□ -0.32
PCDHGA9-202ENST00000616887 A0A1W2PQ27 194 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 A0A1W2PQ64 194 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 A0A1W2PQD8 194 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 FGRP09769 529 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 FUT2Q10981 343 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 PKN1Q16512 942 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 NOSTRINQ8IVI9 506 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 MAPKAPK5Q8IW41 473 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 CD209Q9NNX6 404 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 MTMR7Q9Y216 660 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 PSDA5PKW4 1024 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 WNT7AO00755 349 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 USP5P45974 858 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 ZNF804AQ7Z570 1209 aa13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 V9GY48 417 aaPredicted RBP13.07□□□□□ -0.32
PCDHGA9-202ENST00000616887 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 ZNF202O95125 648 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 DEXIO95424 95 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 PLCD1P51178 756 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 DPCR1Q3MIW9 517 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 CACTINQ8WUQ7 758 aaKnown RBP13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 ATP8A2Q9NTI2 1148 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 PCDHB6Q9Y5E3 794 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 LOC102724159A0A0B4J2E5 919 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 NOP2P46087 812 aaKnown RBP13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 IQCB1Q15051 598 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 PWP2Q15269 919 aaKnown RBP13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 SYT10Q6XYQ8 523 aa13.06□□□□□ -0.32
PCDHGA9-202ENST00000616887 CATIPQ7Z7H3 387 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms