RNA–Protein interactions for RNA: ENST00000615234.4

POLR2E-213, Transcript of RNA polymerase II subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2E, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-213ENST00000615234 ANKRD18AQ8IVF6 992 aa16.95■□□□□ 0.3
POLR2E-213ENST00000615234 NOL10Q9BSC4 688 aaKnown RBP16.95■□□□□ 0.3
POLR2E-213ENST00000615234 BRIP1Q9BX63 1249 aa16.95■□□□□ 0.3
POLR2E-213ENST00000615234 AATFQ9NY61 560 aaKnown RBP eCLIP16.95■□□□□ 0.3
POLR2E-213ENST00000615234 A0A087X0B3 334 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 PLEKHA8P1O95397 391 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 DNAI1Q9UI46 699 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 V9GY48 417 aaPredicted RBP16.94■□□□□ 0.3
POLR2E-213ENST00000615234 PHLPP2Q6ZVD8 1323 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 FANCGO15287 622 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 FGRP09769 529 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 XBP1P17861 261 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 KRT2P35908 639 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 TROAPQ12815 778 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
POLR2E-213ENST00000615234 UTP14CQ5TAP6 766 aaKnown RBP16.94■□□□□ 0.3
POLR2E-213ENST00000615234 FCHSD1Q86WN1 690 aa16.94■□□□□ 0.3
POLR2E-213ENST00000615234 ARHGAP6O43182 974 aa16.93■□□□□ 0.3
POLR2E-213ENST00000615234 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
POLR2E-213ENST00000615234 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
POLR2E-213ENST00000615234 CATIPQ7Z7H3 387 aa16.93■□□□□ 0.3
POLR2E-213ENST00000615234 EPSTI1Q96J88 318 aa16.93■□□□□ 0.3
POLR2E-213ENST00000615234 FAM84BQ96KN1 310 aaPredicted RBP16.93■□□□□ 0.3
POLR2E-213ENST00000615234 SAMSN1Q9NSI8 373 aaKnown RBP16.93■□□□□ 0.3
POLR2E-213ENST00000615234 BSDC1Q9NW68 430 aaPredicted RBP16.93■□□□□ 0.3
POLR2E-213ENST00000615234 ZNF652Q9Y2D9 606 aa16.93■□□□□ 0.3
POLR2E-213ENST00000615234 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.93■□□□□ 0.3
POLR2E-213ENST00000615234 WNT7AO00755 349 aa16.93■□□□□ 0.3
POLR2E-213ENST00000615234 MINPP1Q9UNW1 487 aa16.93■□□□□ 0.3
POLR2E-213ENST00000615234 PLCD1P51178 756 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 ERCC6LQ2NKX8 1250 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 SPECC1LQ69YQ0 1117 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 CTR9Q6PD62 1173 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 TC2NQ8N9U0 490 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 DHX58Q96C10 678 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 THRAP3Q9Y2W1 955 aaKnown RBP16.92■□□□□ 0.3
POLR2E-213ENST00000615234 SCN7AQ01118 1682 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 NPHP1O15259 732 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 ERCC5P28715 1186 aaPredicted RBP16.92■□□□□ 0.3
POLR2E-213ENST00000615234 CAVIN4Q5BKX8 364 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 PKNOX2Q96KN3 472 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 BAG1Q99933 345 aaPredicted RBP16.92■□□□□ 0.3
POLR2E-213ENST00000615234 RBM28Q9NW13 759 aaKnown RBP16.92■□□□□ 0.3
POLR2E-213ENST00000615234 DLEC1Q9Y238 1755 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 NPY5RQ15761 445 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 NOM1Q5C9Z4 860 aaKnown RBP16.92■□□□□ 0.3
POLR2E-213ENST00000615234 CLEC4GQ6UXB4 293 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 SH3RF1Q7Z6J0 888 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 IQCA1Q86XH1 822 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 TNFRSF25Q93038 417 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 PPP2R2CQ9Y2T4 447 aa16.92■□□□□ 0.3
POLR2E-213ENST00000615234 VWA3AA6NCI4 1184 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 ZSCAN12O43309 604 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 EVX2Q03828 476 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 NR1I3Q14994 352 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 GTPBP4Q9BZE4 634 aaKnown RBP16.91■□□□□ 0.3
POLR2E-213ENST00000615234 CASZ1Q86V15 1759 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 EP400Q96L91 3159 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 AFF2P51816 1311 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 USP17L12C9JPN9 530 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 USP17L21D6R901 530 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 SLFN14P0C7P3 912 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 ADKP55263 362 aaKnown RBP16.91■□□□□ 0.3
POLR2E-213ENST00000615234 TMTC3Q6ZXV5 915 aa16.91■□□□□ 0.3
POLR2E-213ENST00000615234 SYMPKQ92797 1274 aaKnown RBP16.91■□□□□ 0.3
POLR2E-213ENST00000615234 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
POLR2E-213ENST00000615234 CALM1P0DP23 149 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 CALM2P0DP24 149 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 CALM3P0DP25 149 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 PCP11498 1178 aaKnown RBP16.9■□□□□ 0.3
POLR2E-213ENST00000615234 AFMP43652 599 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 PAGE5Q96GU1 130 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 USP21Q9UK80 565 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 COL5A3P25940 1745 aaPredicted RBP16.9■□□□□ 0.3
POLR2E-213ENST00000615234 NRAPQ86VF7 1730 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 KCNQ2O43526 872 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 STX10O60499 249 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 CASP1P29466 404 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 FERMT2Q96AC1 680 aa16.9■□□□□ 0.3
POLR2E-213ENST00000615234 NSUN4Q96CB9 384 aaKnown RBP16.9■□□□□ 0.3
POLR2E-213ENST00000615234 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
POLR2E-213ENST00000615234 CNTNAP5Q8WYK1 1306 aa16.89■□□□□ 0.3
POLR2E-213ENST00000615234 A0A1B0GTH6 734 aa16.89■□□□□ 0.29
POLR2E-213ENST00000615234 DDAH1O94760 285 aa16.89■□□□□ 0.29
POLR2E-213ENST00000615234 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.29
POLR2E-213ENST00000615234 H2AFXP16104 143 aaPredicted RBP16.89■□□□□ 0.29
POLR2E-213ENST00000615234 KLRK1P26718 216 aa16.89■□□□□ 0.29
POLR2E-213ENST00000615234 ZNF174Q15697 407 aa16.89■□□□□ 0.29
POLR2E-213ENST00000615234 APTXQ7Z2E3 356 aaKnown RBP16.89■□□□□ 0.29
POLR2E-213ENST00000615234 FBXO33Q7Z6M2 555 aa16.89■□□□□ 0.29
POLR2E-213ENST00000615234 FAM53CQ9NYF3 392 aa16.89■□□□□ 0.29
POLR2E-213ENST00000615234 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.29
POLR2E-213ENST00000615234 ZNF446Q9NWS9 450 aa16.89■□□□□ 0.29
POLR2E-213ENST00000615234 NMT2O60551 498 aa16.88■□□□□ 0.29
POLR2E-213ENST00000615234 BMP15O95972 392 aa16.88■□□□□ 0.29
POLR2E-213ENST00000615234 CUL4BQ13620 913 aa16.88■□□□□ 0.29
POLR2E-213ENST00000615234 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
POLR2E-213ENST00000615234 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
POLR2E-213ENST00000615234 CCDC34Q96HJ3 373 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms