RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 TBC1D8O95759 1140 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 IRX5P78411 483 aaPredicted RBP12.78□□□□□ -0.36
ATF3-211ENST00000613954 MUM1L1Q5H9M0 696 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 TRIML1Q8N9V2 468 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 MLKLQ8NB16 471 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
ATF3-211ENST00000613954 GOLGA1Q92805 767 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 TMEM87BQ96K49 555 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 GJB4Q9NTQ9 266 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 TMEM51Q9NW97 253 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 LRP2BPQ9P2M1 347 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 IQSEC3Q9UPP2 1182 aaPredicted RBP12.78□□□□□ -0.36
ATF3-211ENST00000613954 LEMD3Q9Y2U8 911 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 PCDHA5Q9Y5H7 936 aa12.78□□□□□ -0.36
ATF3-211ENST00000613954 STK36Q9NRP7 1315 aa12.77□□□□□ -0.36
ATF3-211ENST00000613954 ZBTB22O15209 634 aa12.77□□□□□ -0.37
ATF3-211ENST00000613954 FANCGO15287 622 aa12.77□□□□□ -0.37
ATF3-211ENST00000613954 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
ATF3-211ENST00000613954 HIBADHP31937 336 aaKnown RBP12.77□□□□□ -0.37
ATF3-211ENST00000613954 HNRNPH2P55795 449 aaKnown RBP12.77□□□□□ -0.37
ATF3-211ENST00000613954 CT47A1Q5JQC4 288 aaPredicted RBP12.77□□□□□ -0.37
ATF3-211ENST00000613954 KRI1Q8N9T8 703 aaKnown RBP12.77□□□□□ -0.37
ATF3-211ENST00000613954 WASF1Q92558 559 aa12.77□□□□□ -0.37
ATF3-211ENST00000613954 AIDAQ96BJ3 306 aa12.77□□□□□ -0.37
ATF3-211ENST00000613954 COL1A1P02452 1464 aaPredicted RBP12.77□□□□□ -0.37
ATF3-211ENST00000613954 XDHP47989 1333 aa12.77□□□□□ -0.37
ATF3-211ENST00000613954 CCDC151A5D8V7 595 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 TMEM232C9JQI7 657 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 SH2B2O14492 632 aaPredicted RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 KLRK1P26718 216 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 OAS2P29728 719 aaKnown RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 IARSP41252 1262 aaKnown RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 TUBB2AQ13885 445 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 BRD3Q15059 726 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 LONRF3Q496Y0 759 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 KANK3Q6NY19 840 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 PDILTQ8N807 584 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 TC2NQ8N9U0 490 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 STRBPQ96SI9 672 aaKnown RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 TUBB2BQ9BVA1 445 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 NAA15Q9BXJ9 866 aaKnown RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 ANKIB1Q9P2G1 1089 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 PNPLA7Q6ZV29 1317 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 POLR3GO15318 223 aaPredicted RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 BBOX1O75936 387 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 SEC31AO94979 1220 aaKnown RBP12.76□□□□□ -0.37
ATF3-211ENST00000613954 ZNF18P17022 549 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 KIFC2Q96AC6 838 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 CCDC34Q96HJ3 373 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 CRAMP1Q96RY5 1269 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATF3-211ENST00000613954 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 PSD3Q9NYI0 1048 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 NRXN2Q9P2S2 1712 aa12.76□□□□□ -0.37
ATF3-211ENST00000613954 ZBTB43O43298 467 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 MBD4O95243 580 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 CCDC175P0C221 793 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 TXLNAP40222 546 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 MDM2Q00987 491 aaPredicted RBP12.75□□□□□ -0.37
ATF3-211ENST00000613954 POSTNQ15063 836 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 ALX1Q15699 326 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 APOA5Q6Q788 366 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 FAM177A1Q8N128 213 aaPredicted RBP12.75□□□□□ -0.37
ATF3-211ENST00000613954 BBXQ8WY36 941 aaPredicted RBP12.75□□□□□ -0.37
ATF3-211ENST00000613954 BRIP1Q9BX63 1249 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 CWC15Q9P013 229 aaKnown RBP12.75□□□□□ -0.37
ATF3-211ENST00000613954 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
ATF3-211ENST00000613954 SASH3O75995 380 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 GNAT2P19087 354 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATF3-211ENST00000613954 C15orf52Q6ZUT6 534 aaKnown RBP12.74□□□□□ -0.37
ATF3-211ENST00000613954 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 SGMS1Q86VZ5 419 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 RAB11FIP4Q86YS3 637 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 FOXP4Q8IVH2 680 aaPredicted RBP12.74□□□□□ -0.37
ATF3-211ENST00000613954 MSL3Q8N5Y2 521 aaKnown RBP12.74□□□□□ -0.37
ATF3-211ENST00000613954 CEP112Q8N8E3 955 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 SMARCE1Q969G3 411 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 EXOC4Q96A65 974 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 CLIC6Q96NY7 704 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 PANX2Q96RD6 677 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 WDR24Q96S15 920 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 PARD6BQ9BYG5 372 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 RAI14Q9P0K7 980 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 ABCF2Q9UG63 623 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 NFE2L3Q9Y4A8 694 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 PATL2C9JE40 543 aaKnown RBP12.74□□□□□ -0.37
ATF3-211ENST00000613954 APPP05067 770 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 ERCC5P28715 1186 aaPredicted RBP12.74□□□□□ -0.37
ATF3-211ENST00000613954 ZNF579Q8NAF0 562 aaKnown RBP12.74□□□□□ -0.37
ATF3-211ENST00000613954 HNRNPLLQ8WVV9 542 aaKnown RBP12.74□□□□□ -0.37
ATF3-211ENST00000613954 AIFM3Q96NN9 605 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 CAMKK2Q96RR4 588 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
ATF3-211ENST00000613954 GOLGA8AA7E2F4 631 aa12.73□□□□□ -0.37
ATF3-211ENST00000613954 MMP10P09238 476 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms