RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 KBTBD3Q8NAB2 608 aa27.36■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L15C9J2P7 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L13C9JLJ4 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L11C9JVI0 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L18D6R9N7 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L22D6RA61 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L17D6RBQ6 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L19D6RCP7 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L20D6RJB6 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 CHGBP05060 677 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 INHAP05111 366 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 GUCY1A2P33402 732 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 GJA8P48165 433 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 USP17L24Q0WX57 530 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 SEPT2Q15019 361 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 ACER1Q8TDN7 264 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 SHISA4Q96DD7 197 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 SLC4A4Q9Y6R1 1079 aa27.35■■□□□ 1.97
FAM228B-208ENST00000613899 VCAM1P19320 739 aa27.34■■□□□ 1.97
FAM228B-208ENST00000613899 TMEM179Q6ZVK1 233 aa27.34■■□□□ 1.97
FAM228B-208ENST00000613899 SLC44A5Q8NCS7 719 aa27.34■■□□□ 1.97
FAM228B-208ENST00000613899 PUS7LQ9H0K6 701 aaKnown RBP27.34■■□□□ 1.97
FAM228B-208ENST00000613899 TXNRD2Q9NNW7 524 aa27.34■■□□□ 1.97
FAM228B-208ENST00000613899 PLXNB2O15031 1838 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 ERVK-9P63128 1117 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 ERVK-24P63145 666 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 C12orf60Q5U649 245 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 PAGR1Q9BTK6 254 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 UNC93B1Q9H1C4 597 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 RBPJLQ9UBG7 517 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 TTC41PQ6P2S7 1318 aa27.33■■□□□ 1.97
FAM228B-208ENST00000613899 MAPK4P31152 587 aa27.32■■□□□ 1.96
FAM228B-208ENST00000613899 TSHZ3Q63HK5 1081 aa27.32■■□□□ 1.96
FAM228B-208ENST00000613899 CCAR1Q8IX12 1150 aaKnown RBP27.32■■□□□ 1.96
FAM228B-208ENST00000613899 SOCS4Q8WXH5 440 aa27.32■■□□□ 1.96
FAM228B-208ENST00000613899 DYNLL2Q96FJ2 89 aa27.32■■□□□ 1.96
FAM228B-208ENST00000613899 GJD2Q9UKL4 321 aa27.32■■□□□ 1.96
FAM228B-208ENST00000613899 USP17L12C9JPN9 530 aa27.31■■□□□ 1.96
FAM228B-208ENST00000613899 USP17L21D6R901 530 aa27.31■■□□□ 1.96
FAM228B-208ENST00000613899 ERC2O15083 957 aa27.31■■□□□ 1.96
FAM228B-208ENST00000613899 ZFYP08048 801 aaPredicted RBP27.31■■□□□ 1.96
FAM228B-208ENST00000613899 CATSPERGQ6ZRH7 1159 aa27.31■■□□□ 1.96
FAM228B-208ENST00000613899 CCDC17Q96LX7 622 aa27.31■■□□□ 1.96
FAM228B-208ENST00000613899 ARPP21Q9UBL0 812 aaPredicted RBP27.31■■□□□ 1.96
FAM228B-208ENST00000613899 RABGAP1Q9Y3P9 1069 aa27.31■■□□□ 1.96
FAM228B-208ENST00000613899 HMGCRP04035 888 aa27.3■■□□□ 1.96
FAM228B-208ENST00000613899 CAPN2P17655 700 aa27.3■■□□□ 1.96
FAM228B-208ENST00000613899 LRRFIP1Q32MZ4 808 aaKnown RBP27.3■■□□□ 1.96
FAM228B-208ENST00000613899 C16orf86Q6ZW13 317 aa27.3■■□□□ 1.96
FAM228B-208ENST00000613899 U2AF1L4Q8WU68 220 aaKnown RBP27.3■■□□□ 1.96
FAM228B-208ENST00000613899 APPBP2Q92624 585 aa27.3■■□□□ 1.96
FAM228B-208ENST00000613899 YTHDC1Q96MU7 727 aaKnown RBP27.3■■□□□ 1.96
FAM228B-208ENST00000613899 RPAP3Q9H6T3 665 aaPredicted RBP27.3■■□□□ 1.96
FAM228B-208ENST00000613899 PEX10O60683 326 aa27.29■■□□□ 1.96
FAM228B-208ENST00000613899 LBX2Q6XYB7 198 aa27.29■■□□□ 1.96
FAM228B-208ENST00000613899 CRBNQ96SW2 442 aa27.29■■□□□ 1.96
FAM228B-208ENST00000613899 NUDT12Q9BQG2 462 aa27.29■■□□□ 1.96
FAM228B-208ENST00000613899 CYP2D7A0A087X1C5 515 aa27.28■■□□□ 1.96
FAM228B-208ENST00000613899 RNF113AO15541 343 aaKnown RBP27.28■■□□□ 1.96
FAM228B-208ENST00000613899 AKR1B1P15121 316 aa27.28■■□□□ 1.96
FAM228B-208ENST00000613899 CDK8P49336 464 aa27.28■■□□□ 1.96
FAM228B-208ENST00000613899 CCNA1P78396 465 aa27.28■■□□□ 1.96
FAM228B-208ENST00000613899 CTR9Q6PD62 1173 aa27.28■■□□□ 1.96
FAM228B-208ENST00000613899 STRBPQ96SI9 672 aaKnown RBP27.28■■□□□ 1.96
FAM228B-208ENST00000613899 SH2D4AQ9H788 454 aa27.28■■□□□ 1.96
FAM228B-208ENST00000613899 ARHGEF10LQ9HCE6 1279 aa27.28■■□□□ 1.96
FAM228B-208ENST00000613899 A0A1W2PRG0 241 aa27.27■■□□□ 1.96
FAM228B-208ENST00000613899 GLRX3O76003 335 aaKnown RBP27.27■■□□□ 1.96
FAM228B-208ENST00000613899 SGPL1O95470 568 aa27.27■■□□□ 1.96
FAM228B-208ENST00000613899 ICA1Q05084 483 aa27.27■■□□□ 1.96
FAM228B-208ENST00000613899 Q3C1V9 767 aa27.27■■□□□ 1.96
FAM228B-208ENST00000613899 GIMAP6Q6P9H5 292 aa27.27■■□□□ 1.96
FAM228B-208ENST00000613899 GCC1Q96CN9 775 aa27.27■■□□□ 1.96
FAM228B-208ENST00000613899 PORCNQ9H237 461 aa27.27■■□□□ 1.96
FAM228B-208ENST00000613899 CWC22Q9HCG8 908 aaKnown RBP27.27■■□□□ 1.96
FAM228B-208ENST00000613899 PAK6Q9NQU5 681 aaPredicted RBP27.27■■□□□ 1.96
FAM228B-208ENST00000613899 ZBTB47Q9UFB7 747 aaPredicted RBP27.27■■□□□ 1.96
FAM228B-208ENST00000613899 POTEEQ6S8J3 1075 aa27.26■■□□□ 1.95
FAM228B-208ENST00000613899 GPR142Q7Z601 462 aa27.26■■□□□ 1.95
FAM228B-208ENST00000613899 OSBP2Q969R2 916 aa27.26■■□□□ 1.95
FAM228B-208ENST00000613899 SPDYE16A6NNV3 312 aaPredicted RBP27.25■■□□□ 1.95
FAM228B-208ENST00000613899 XRCC5P13010 732 aaKnown RBP27.25■■□□□ 1.95
FAM228B-208ENST00000613899 GNAT2P19087 354 aa27.25■■□□□ 1.95
FAM228B-208ENST00000613899 MX1P20591 662 aa27.25■■□□□ 1.95
FAM228B-208ENST00000613899 PLEKHH3Q7Z736 793 aa27.25■■□□□ 1.95
FAM228B-208ENST00000613899 TRMT44Q8IYL2 757 aaKnown RBP27.25■■□□□ 1.95
FAM228B-208ENST00000613899 PI4K2BQ8TCG2 481 aa27.25■■□□□ 1.95
FAM228B-208ENST00000613899 LPAR1Q92633 364 aa27.25■■□□□ 1.95
FAM228B-208ENST00000613899 DEFB118Q96PH6 123 aa27.25■■□□□ 1.95
FAM228B-208ENST00000613899 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.25■■□□□ 1.95
FAM228B-208ENST00000613899 SMIM22K7EJ46 135 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 CNMDO75829 334 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 CYP2B6P20813 491 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 SBK1Q52WX2 424 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 UBE2Q1Q7Z7E8 422 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 TRIB2Q92519 343 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 TANGO6Q9C0B7 1094 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 TMX2Q9Y320 296 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 A0A0G2JMZ2 1700 aa27.24■■□□□ 1.95
FAM228B-208ENST00000613899 GSG1L2A8MUP6 293 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms