RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	USP17L20	D6RJB6	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	RAB11FIP3	O75154	756 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	SHMT1	P34896	483 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	PLCD1	P51178	756 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	USP17L24	Q0WX57	530 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	ABCB5	Q2M3G0	1257 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	CERKL	Q49MI3	558 aa	Predicted RBP	13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	MORN1	Q5T089	497 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	SLC9C2	Q5TAH2	1124 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	CHRDL2	Q6WN34	429 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	TRIB2	Q92519	343 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	CHMP4B	Q9H444	224 aa	Known RBP	13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508	RABGAP1	Q9Y3P9	1069 aa		13.51	□□□□□ -0.25
CBWD1-222	ENST00000613508		A0A1W2PPC1	479 aa		13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	MNX1	P50219	401 aa	Predicted RBP	13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	TRIM32	Q13049	653 aa		13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508		Q3C1V9	767 aa		13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	NECAB2	Q7Z6G3	386 aa		13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	PAWR	Q96IZ0	340 aa	Known RBP	13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	PORCN	Q9H237	461 aa		13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	RBM27	Q9P2N5	1060 aa	Known RBP	13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	OGDHL	Q9ULD0	1010 aa		13.5	□□□□□ -0.25
CBWD1-222	ENST00000613508	ZNF532	Q9HCE3	1301 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	EVI5	O60447	810 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	PEX10	O60683	326 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	IFIT2	P09913	472 aa	Known RBP	13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	VCAM1	P19320	739 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	CCNA1	P78396	465 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	PDE3A	Q14432	1141 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	RAB3GAP1	Q15042	981 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	CATSPERG	Q6ZRH7	1159 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	GPR142	Q7Z601	462 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	PLEKHH3	Q7Z736	793 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	ACER1	Q8TDN7	264 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	FEZ1	Q99689	392 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	CABP5	Q9NP86	173 aa		13.49	□□□□□ -0.25
CBWD1-222	ENST00000613508	GOLIM4	O00461	696 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	CNMD	O75829	334 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	POLR3D	P05423	398 aa	Predicted RBP	13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	PRKAR2A	P13861	404 aa	Known RBP	13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	ATP5J	P18859	108 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	CYP2B6	P20813	491 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	GUCY1A2	P33402	732 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	RGS2	P41220	211 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	DIS3L	Q8TF46	1054 aa	Known RBP	13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	APBA2	Q99767	749 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	NBPF3	Q9H094	633 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	COG6	Q9Y2V7	657 aa		13.48	□□□□□ -0.25
CBWD1-222	ENST00000613508	GLRX3	O76003	335 aa	Known RBP	13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	HOXC6	P09630	235 aa		13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	ZKSCAN1	P17029	563 aa	Predicted RBP	13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	CCAR1	Q8IX12	1150 aa	Known RBP	13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	DNAJC2	Q99543	621 aa	Known RBP	13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	HAUS7	Q99871	368 aa		13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	PAGR1	Q9BTK6	254 aa		13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	PAG1	Q9NWQ8	432 aa		13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	MCM9	Q9NXL9	1143 aa		13.47	□□□□□ -0.25
CBWD1-222	ENST00000613508	NAV1	Q8NEY1	1877 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	SLC15A5	A6NIM6	579 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	ADD2	P35612	726 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	CACNB2	Q08289	660 aa	Predicted RBP	13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	MAP2K5	Q13163	448 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	SEPT2	Q15019	361 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	ZYX	Q15942	572 aa	Known RBP	13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	LCORL	Q8N3X6	602 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	ATP8A2	Q9NTI2	1148 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	SWAP70	Q9UH65	585 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508	RCAN3	Q9UKA8	241 aa		13.46	□□□□□ -0.25
CBWD1-222	ENST00000613508		A0A1W2PRG0	241 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	APBB1	O00213	710 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	IGHA2	P01877	340 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	COL6A1	P12109	1028 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	PTPRE	P23469	700 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	BMP8B	P34820	402 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	EVX2	Q03828	476 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	GRB14	Q14449	540 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	UBE3C	Q15386	1083 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	CCL14	Q16627	93 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	LHX8	Q68G74	356 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	TMEM179	Q6ZVK1	233 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	SDR42E1	Q8WUS8	393 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	EDC3	Q96F86	508 aa	Known RBP	13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	C11orf49	Q9H6J7	331 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	HOXC10	Q9NYD6	342 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	BTBD7	Q9P203	1132 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	LAMA2	P24043	3122 aa	Known RBP	13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	ALPK3	Q96L96	1907 aa		13.45	□□□□□ -0.26
CBWD1-222	ENST00000613508	COL6A3	P12111	3177 aa		13.44	□□□□□ -0.26
CBWD1-222	ENST00000613508	COG2	Q14746	738 aa		13.44	□□□□□ -0.26
CBWD1-222	ENST00000613508	SIAH1	Q8IUQ4	282 aa		13.44	□□□□□ -0.26
CBWD1-222	ENST00000613508	LPAR1	Q92633	364 aa		13.44	□□□□□ -0.26
CBWD1-222	ENST00000613508	GDF15	Q99988	308 aa		13.44	□□□□□ -0.26
CBWD1-222	ENST00000613508	ARMT1	Q9H993	441 aa		13.44	□□□□□ -0.26
CBWD1-222	ENST00000613508	MBD4	O95243	580 aa		13.43	□□□□□ -0.26
CBWD1-222	ENST00000613508	CYP2D6	P10635	497 aa		13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms