RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 CCDC169A6NNP5 214 aa13.65□□□□□ -0.23
HLCS-207ENST00000612277 GPC4O75487 556 aa13.65□□□□□ -0.23
HLCS-207ENST00000612277 MTX1Q13505 466 aa13.65□□□□□ -0.23
HLCS-207ENST00000612277 ZNF449Q6P9G9 518 aa13.65□□□□□ -0.23
HLCS-207ENST00000612277 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.23
HLCS-207ENST00000612277 TRIM55Q9BYV6 548 aa13.65□□□□□ -0.23
HLCS-207ENST00000612277 CAPN11Q9UMQ6 739 aa13.65□□□□□ -0.23
HLCS-207ENST00000612277 B4DLN1 442 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 KRIT1O00522 736 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 HSPA8P11142 646 aaKnown RBP13.64□□□□□ -0.23
HLCS-207ENST00000612277 MRPL12P52815 198 aaKnown RBP13.64□□□□□ -0.23
HLCS-207ENST00000612277 UBE3BQ7Z3V4 1068 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 FAM186BQ8IYM0 893 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 TSC1Q92574 1164 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
HLCS-207ENST00000612277 CCDC184Q52MB2 194 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 PDXDC1Q6P996 788 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 OGFOD1Q8N543 542 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 MLKLQ8NB16 471 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 POMGNT1Q8WZA1 660 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 ZBTB21Q9ULJ3 1066 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 EXOC7Q9UPT5 735 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 HDAC1Q13547 482 aaPredicted RBP13.64□□□□□ -0.23
HLCS-207ENST00000612277 KLHL29Q96CT2 875 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 INTS9Q9NV88 658 aaKnown RBP13.64□□□□□ -0.23
HLCS-207ENST00000612277 DBNLQ9UJU6 430 aaKnown RBP13.64□□□□□ -0.23
HLCS-207ENST00000612277 TMTC4Q5T4D3 741 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 BSPRYQ5W0U4 402 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 CCDC51Q96ER9 411 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 CDC5LQ99459 802 aaKnown RBP13.64□□□□□ -0.23
HLCS-207ENST00000612277 MYO1AQ9UBC5 1043 aa13.64□□□□□ -0.23
HLCS-207ENST00000612277 HNRNPCP07910 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLCS-207ENST00000612277 NBPF10Q6P3W6 841 aaKnown RBP13.63□□□□□ -0.23
HLCS-207ENST00000612277 PPP1R42Q7Z4L9 355 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 TRIM42Q8IWZ5 723 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 WWC3Q9ULE0 1092 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 SLC4A7Q9Y6M7 1214 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 ATP8B1O43520 1251 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 BCRP11274 1271 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 ANKRD35Q8N283 1001 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 MAP3K2Q9Y2U5 619 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 KIF11P52732 1056 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 APOBRQ0VD83 1088 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 BBOF1Q8ND07 529 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 YIPF3Q9GZM5 350 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 TMOD3Q9NYL9 352 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 NOP53Q9NZM5 478 aaKnown RBP13.63□□□□□ -0.23
HLCS-207ENST00000612277 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.63□□□□□ -0.23
HLCS-207ENST00000612277 SMTNP53814 917 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 RAB20Q9NX57 234 aa13.63□□□□□ -0.23
HLCS-207ENST00000612277 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
HLCS-207ENST00000612277 CYP7A1P22680 504 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 LDHAL6AQ6ZMR3 332 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DIABLOQ9NR28 239 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 POLE3Q9NRF9 147 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 ZNF711Q9Y462 761 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 SMARCA4P51532 1647 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DDX42Q86XP3 938 aaKnown RBP eCLIP13.62□□□□□ -0.23
HLCS-207ENST00000612277 DDX28Q9NUL7 540 aaKnown RBP13.62□□□□□ -0.23
HLCS-207ENST00000612277 MRPS15P82914 257 aaKnown RBP13.62□□□□□ -0.23
HLCS-207ENST00000612277 TRPC5Q9UL62 973 aaPredicted RBP13.62□□□□□ -0.23
HLCS-207ENST00000612277 A0A1B0GW55 424 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DUX4L2P0CJ85 424 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DUX4L3P0CJ86 424 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DUX4L4P0CJ87 422 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DUX4L5P0CJ88 424 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DUX4L6P0CJ89 424 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DUX4L7P0CJ90 424 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 ZNF174Q15697 407 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 TRIM15Q9C019 465 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DPH5Q9H2P9 285 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 DUX4Q9UBX2 424 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 TTLL3Q9Y4R7 772 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
HLCS-207ENST00000612277 S100BP04271 92 aaPredicted RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 EEF1GP26641 437 aaKnown RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 TRMT10CQ7L0Y3 403 aaKnown RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 ZGPATQ8N5A5 531 aaKnown RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 KCNH3Q9ULD8 1083 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 KCNK3O14649 394 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 ATF2P15336 505 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 NPR1P16066 1061 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 ZNF445P59923 1031 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 HARSP12081 509 aaKnown RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 DTNBP1Q96EV8 351 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 SERPINI1Q99574 410 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 ZNF644Q9H582 1327 aaPredicted RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 PSMD7P51665 324 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 PSMC1P62191 440 aaKnown RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 MRPL28Q13084 256 aaKnown RBP13.61□□□□□ -0.23
HLCS-207ENST00000612277 ICE2Q659A1 982 aa13.61□□□□□ -0.23
HLCS-207ENST00000612277 SPZ1Q9BXG8 430 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms