RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 RESTQ13127 1097 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 CMTR1Q8N1G2 835 aaKnown RBP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 PNMA1Q8ND90 353 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 FBXO18Q8NFZ0 1043 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 CTCFLQ8NI51 663 aaPredicted RBP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 TMEM47Q9BQJ4 181 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 ZSCAN16Q9H4T2 348 aaPredicted RBP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 ZNF70Q9UC06 446 aaPredicted RBP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 MYH8P13535 1937 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 SIPA1L1O43166 1804 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 AKR1B1P15121 316 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 NOVP48745 357 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 DNM1Q05193 864 aaKnown RBP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 ARHGAP27Q6ZUM4 889 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 TRIM22Q8IYM9 498 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 CCDC82Q8N4S0 544 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 CEP95Q96GE4 821 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 ZBED3Q96IU2 234 aaPredicted RBP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 MAP3K14Q99558 947 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 DNAJC18Q9H819 358 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 MYOZ2Q9NPC6 264 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 TAOK2Q9UL54 1235 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 TCHHQ07283 1943 aa14.31□□□□□ -0.12
CBWD1-220ENST00000612045 COL2A1P02458 1487 aaPredicted RBP14.31□□□□□ -0.12
CBWD1-220ENST00000612045 TCP10L2B9ZVM9 353 aa14.3□□□□□ -0.12
CBWD1-220ENST00000612045 SLURP2P0DP57 97 aa14.3□□□□□ -0.12
CBWD1-220ENST00000612045 ZNF280AP59817 542 aaPredicted RBP14.3□□□□□ -0.12
CBWD1-220ENST00000612045 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
CBWD1-220ENST00000612045 FKBP1CQ5VVH2 108 aa14.3□□□□□ -0.12
CBWD1-220ENST00000612045 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
CBWD1-220ENST00000612045 TMTC3Q6ZXV5 915 aa14.3□□□□□ -0.12
CBWD1-220ENST00000612045 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
CBWD1-220ENST00000612045 FOXP4Q8IVH2 680 aaPredicted RBP14.3□□□□□ -0.12
CBWD1-220ENST00000612045 AIFM3Q96NN9 605 aa14.3□□□□□ -0.12
CBWD1-220ENST00000612045 SYT17Q9BSW7 474 aa14.3□□□□□ -0.12
CBWD1-220ENST00000612045 IGKV6D-41A0A0C4DH26 115 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 SHTN1A0MZ66 631 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 UBE2Q2LH0YL09 131 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 WNT10BO00744 389 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 FUT2Q10981 343 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 FAM173BQ6P4H8 233 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 WASF1Q92558 559 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
CBWD1-220ENST00000612045 GDPD2Q9HCC8 539 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 GJB4Q9NTQ9 266 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 MYO1BO43795 1136 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 DEXIO95424 95 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 TOP1P11387 765 aaKnown RBP14.29□□□□□ -0.12
CBWD1-220ENST00000612045 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
CBWD1-220ENST00000612045 LMNB1P20700 586 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 KIF5BP33176 963 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 GUCY1A2P33402 732 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 GMPSP49915 693 aaPredicted RBP14.29□□□□□ -0.12
CBWD1-220ENST00000612045 NBPF9Q3BBW0 867 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 USP48Q86UV5 1035 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 TMEM87AQ8NBN3 555 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 FAM151AQ8WW52 585 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 DPF2Q92785 391 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 VEZTQ9HBM0 779 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 MTMR4Q9NYA4 1195 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
CBWD1-220ENST00000612045 FAM196BA6NMK8 535 aa14.28□□□□□ -0.12
CBWD1-220ENST00000612045 KRT85P78386 507 aa14.28□□□□□ -0.12
CBWD1-220ENST00000612045 TATDN1Q6P1N9 297 aa14.28□□□□□ -0.12
CBWD1-220ENST00000612045 CCDC17Q96LX7 622 aa14.28□□□□□ -0.12
CBWD1-220ENST00000612045 CSRNP1Q96S65 589 aa14.28□□□□□ -0.12
CBWD1-220ENST00000612045 ZNF541Q9H0D2 1346 aa14.28□□□□□ -0.12
CBWD1-220ENST00000612045 CNTNAP1P78357 1384 aa14.28□□□□□ -0.12
CBWD1-220ENST00000612045 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.12
CBWD1-220ENST00000612045 PRPF3O43395 683 aaKnown RBP14.27□□□□□ -0.12
CBWD1-220ENST00000612045 FIBPO43427 364 aa14.27□□□□□ -0.12
CBWD1-220ENST00000612045 AKAP17AQ02040 695 aaKnown RBP14.27□□□□□ -0.12
CBWD1-220ENST00000612045 GRM4Q14833 912 aa14.27□□□□□ -0.12
CBWD1-220ENST00000612045 CERKLQ49MI3 558 aaPredicted RBP14.27□□□□□ -0.12
CBWD1-220ENST00000612045 KRT40Q6A162 431 aa14.27□□□□□ -0.12
CBWD1-220ENST00000612045 MICALL2Q8IY33 904 aa14.27□□□□□ -0.12
CBWD1-220ENST00000612045 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.12
CBWD1-220ENST00000612045 MAD2L2Q9UI95 211 aa14.27□□□□□ -0.12
CBWD1-220ENST00000612045 DDX49Q9Y6V7 483 aaKnown RBP14.27□□□□□ -0.12
CBWD1-220ENST00000612045 MPHOSPH10O00566 681 aaKnown RBP14.27□□□□□ -0.13
CBWD1-220ENST00000612045 TRIM29Q14134 588 aa14.27□□□□□ -0.13
CBWD1-220ENST00000612045 FAM83AQ86UY5 434 aa14.27□□□□□ -0.13
CBWD1-220ENST00000612045 CNOT7Q9UIV1 285 aaKnown RBP14.27□□□□□ -0.13
CBWD1-220ENST00000612045 GREB1LQ9C091 1923 aaPredicted RBP14.27□□□□□ -0.13
CBWD1-220ENST00000612045 CNTNAP5Q8WYK1 1306 aa14.27□□□□□ -0.13
CBWD1-220ENST00000612045 TTLL1O95922 423 aa14.26□□□□□ -0.13
CBWD1-220ENST00000612045 EGFRP00533 1210 aa14.26□□□□□ -0.13
CBWD1-220ENST00000612045 GNAQP50148 359 aa14.26□□□□□ -0.13
CBWD1-220ENST00000612045 CSPP1Q1MSJ5 1256 aa14.26□□□□□ -0.13
CBWD1-220ENST00000612045 KLHL40Q2TBA0 621 aa14.26□□□□□ -0.13
CBWD1-220ENST00000612045 RBM26Q5T8P6 1007 aaKnown RBP14.26□□□□□ -0.13
CBWD1-220ENST00000612045 STAG2Q8N3U4 1231 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms