RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 SHISA4Q96DD7 197 aa20.92■□□□□ 0.94
PRKN-208ENST00000610470 DDRGK1Q96HY6 314 aa20.92■□□□□ 0.94
PRKN-208ENST00000610470 UNC93B1Q9H1C4 597 aa20.92■□□□□ 0.94
PRKN-208ENST00000610470 MPHOSPH10O00566 681 aaKnown RBP20.91■□□□□ 0.94
PRKN-208ENST00000610470 PRKAB2O43741 272 aa20.91■□□□□ 0.94
PRKN-208ENST00000610470 ACER1Q8TDN7 264 aa20.91■□□□□ 0.94
PRKN-208ENST00000610470 TXNRD2Q9NNW7 524 aa20.91■□□□□ 0.94
PRKN-208ENST00000610470 CYP2D6P10635 497 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 CAPN2P17655 700 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 GUCY1A2P33402 732 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 ERVK-9P63128 1117 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 ERVK-24P63145 666 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 SEPT2Q15019 361 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 CCAR1Q8IX12 1150 aaKnown RBP20.9■□□□□ 0.94
PRKN-208ENST00000610470 GCC1Q96CN9 775 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 RBPJLQ9UBG7 517 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 GJD2Q9UKL4 321 aa20.9■□□□□ 0.94
PRKN-208ENST00000610470 DOCK3Q8IZD9 2030 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 VCAM1P19320 739 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 MAPK4P31152 587 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 RRP1P56182 461 aaKnown RBP20.89■□□□□ 0.93
PRKN-208ENST00000610470 EVX2Q03828 476 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 CATSPERGQ6ZRH7 1159 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 TMEM179Q6ZVK1 233 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 U2AF1L4Q8WU68 220 aaKnown RBP20.89■□□□□ 0.93
PRKN-208ENST00000610470 PAGR1Q9BTK6 254 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 SLC4A4Q9Y6R1 1079 aa20.89■□□□□ 0.93
PRKN-208ENST00000610470 MYH7P12883 1935 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 SLC34A2O95436 690 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 SGPL1O95470 568 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 HMGCRP04035 888 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 CHGBP05060 677 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 KBTBD3Q8NAB2 608 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 SLC44A5Q8NCS7 719 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 SOCS4Q8WXH5 440 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 DYNLL2Q96FJ2 89 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 NUDT12Q9BQG2 462 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 PUS7LQ9H0K6 701 aaKnown RBP20.88■□□□□ 0.93
PRKN-208ENST00000610470 RABGAP1Q9Y3P9 1069 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 PCDHB15Q9Y5E8 787 aa20.88■□□□□ 0.93
PRKN-208ENST00000610470 PEX10O60683 326 aa20.87■□□□□ 0.93
PRKN-208ENST00000610470 Q3C1V9 767 aa20.87■□□□□ 0.93
PRKN-208ENST00000610470 C12orf60Q5U649 245 aa20.87■□□□□ 0.93
PRKN-208ENST00000610470 USP17L12C9JPN9 530 aa20.86■□□□□ 0.93
PRKN-208ENST00000610470 USP17L21D6R901 530 aa20.86■□□□□ 0.93
PRKN-208ENST00000610470 CCNA1P78396 465 aa20.86■□□□□ 0.93
PRKN-208ENST00000610470 CCDC17Q96LX7 622 aa20.86■□□□□ 0.93
PRKN-208ENST00000610470 RPAP3Q9H6T3 665 aaPredicted RBP20.86■□□□□ 0.93
PRKN-208ENST00000610470 CWC22Q9HCG8 908 aaKnown RBP20.86■□□□□ 0.93
PRKN-208ENST00000610470 PAK6Q9NQU5 681 aaPredicted RBP20.86■□□□□ 0.93
PRKN-208ENST00000610470 TTC41PQ6P2S7 1318 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 CYP2B6P20813 491 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 CDK8P49336 464 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 LRRFIP1Q32MZ4 808 aaKnown RBP20.85■□□□□ 0.93
PRKN-208ENST00000610470 TSHZ3Q63HK5 1081 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 LBX2Q6XYB7 198 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 PLEKHH3Q7Z736 793 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 DEFB118Q96PH6 123 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 SH2D4AQ9H788 454 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 ARHGEF10LQ9HCE6 1279 aa20.85■□□□□ 0.93
PRKN-208ENST00000610470 CYP2D7A0A087X1C5 515 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 A0A1W2PRG0 241 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 ERC2O15083 957 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 FARP2O94887 1054 aaPredicted RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 TFRCP02786 760 aaKnown RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 ZFYP08048 801 aaPredicted RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 XRCC5P13010 732 aaKnown RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 AKR1B1P15121 316 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 POTEEQ6S8J3 1075 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 C16orf86Q6ZW13 317 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 GPR142Q7Z601 462 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 UBE2Q1Q7Z7E8 422 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 TRMT44Q8IYL2 757 aaKnown RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 APPBP2Q92624 585 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 STRBPQ96SI9 672 aaKnown RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 HTATIP2Q9BUP3 242 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.84■□□□□ 0.93
PRKN-208ENST00000610470 PORCNQ9H237 461 aa20.84■□□□□ 0.93
PRKN-208ENST00000610470 ARPP21Q9UBL0 812 aaPredicted RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 BAZ2AQ9UIF9 1905 aaKnown RBP20.84■□□□□ 0.93
PRKN-208ENST00000610470 RNF113AO15541 343 aaKnown RBP20.83■□□□□ 0.93
PRKN-208ENST00000610470 CNMDO75829 334 aa20.83■□□□□ 0.93
PRKN-208ENST00000610470 GLRX3O76003 335 aaKnown RBP20.83■□□□□ 0.93
PRKN-208ENST00000610470 RGS2P41220 211 aa20.83■□□□□ 0.93
PRKN-208ENST00000610470 ICA1Q05084 483 aa20.83■□□□□ 0.93
PRKN-208ENST00000610470 CTR9Q6PD62 1173 aa20.83■□□□□ 0.93
PRKN-208ENST00000610470 HMX1Q9NP08 348 aaPredicted RBP20.83■□□□□ 0.93
PRKN-208ENST00000610470 MYH8P13535 1937 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 RPTORQ8N122 1335 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 SPDYE16A6NNV3 312 aaPredicted RBP20.82■□□□□ 0.92
PRKN-208ENST00000610470 GIMAP6Q6P9H5 292 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 TRIB2Q92519 343 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 LPAR1Q92633 364 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 DPF3Q92784 378 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 CRISPLD2Q9H0B8 497 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 HOXC10Q9NYD6 342 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 ZBTB47Q9UFB7 747 aaPredicted RBP20.82■□□□□ 0.92
PRKN-208ENST00000610470 PLXNB2O15031 1838 aa20.82■□□□□ 0.92
PRKN-208ENST00000610470 ZKSCAN1P17029 563 aaPredicted RBP20.81■□□□□ 0.92
PRKN-208ENST00000610470 COG2Q14746 738 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms