RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 PTPN22Q9Y2R2 807 aa12.5□□□□□ -0.41
LINC01001-203ENST00000607448 USP17L5A8MUK1 530 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 CYP2D6P10635 497 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 TMED8Q6PL24 325 aaPredicted RBP12.49□□□□□ -0.41
LINC01001-203ENST00000607448 FASTKD5Q7L8L6 764 aaKnown RBP12.49□□□□□ -0.41
LINC01001-203ENST00000607448 CERS3Q8IU89 383 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 TRIM34Q9BYJ4 488 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 ZBTB21Q9ULJ3 1066 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 PLXNB2O15031 1838 aa12.49□□□□□ -0.41
LINC01001-203ENST00000607448 BCRP11274 1271 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 SHMT1P34896 483 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 MTMR2Q13614 643 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 CRNKL1Q9BZJ0 848 aaKnown RBP12.48□□□□□ -0.41
LINC01001-203ENST00000607448 EHD4Q9H223 541 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 MCM9Q9NXL9 1143 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 SERPINB13Q9UIV8 391 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 AGTPBP1Q9UPW5 1226 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 PTCH2Q9Y6C5 1203 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 PARP14Q460N5 1801 aa12.48□□□□□ -0.41
LINC01001-203ENST00000607448 CYP2D7A0A087X1C5 515 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 TRIM6-TRIM34B2RNG4 842 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 GH2P01242 217 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 ASNSP08243 561 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 RGS19P49795 217 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 GABPAQ06546 454 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 UBE3CQ15386 1083 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 PROCA1Q8NCQ7 364 aaPredicted RBP12.47□□□□□ -0.41
LINC01001-203ENST00000607448 SLC44A5Q8NCS7 719 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
LINC01001-203ENST00000607448 TRIM47Q96LD4 638 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 PARK7Q99497 189 aaKnown RBP12.47□□□□□ -0.41
LINC01001-203ENST00000607448 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.47□□□□□ -0.412e-6■■■■□ 21.3
LINC01001-203ENST00000607448 GREB1LQ9C091 1923 aaPredicted RBP12.47□□□□□ -0.41
LINC01001-203ENST00000607448 POLR3DP05423 398 aaPredicted RBP12.47□□□□□ -0.41
LINC01001-203ENST00000607448 CUL4AQ13619 759 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 SH3D19Q5HYK7 790 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 TTC6Q86TZ1 520 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 KBTBD3Q8NAB2 608 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 DYNLL2Q96FJ2 89 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 AS3MTQ9HBK9 375 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 SLC45A1Q9Y2W3 748 aa12.47□□□□□ -0.41
LINC01001-203ENST00000607448 DDX49Q9Y6V7 483 aaKnown RBP12.47□□□□□ -0.41
LINC01001-203ENST00000607448 RLFQ13129 1914 aa12.46□□□□□ -0.41
LINC01001-203ENST00000607448 PEX10O60683 326 aa12.46□□□□□ -0.42
LINC01001-203ENST00000607448 GUCY1A2P33402 732 aa12.46□□□□□ -0.42
LINC01001-203ENST00000607448 NEK4P51957 841 aa12.46□□□□□ -0.42
LINC01001-203ENST00000607448 BACE1P56817 501 aa12.46□□□□□ -0.42
LINC01001-203ENST00000607448 CERKLQ49MI3 558 aaPredicted RBP12.46□□□□□ -0.42
LINC01001-203ENST00000607448 OSBP2Q969R2 916 aa12.46□□□□□ -0.42
LINC01001-203ENST00000607448 RILPL2Q969X0 211 aa12.46□□□□□ -0.42
LINC01001-203ENST00000607448 TTC41PQ6P2S7 1318 aa12.46□□□□□ -0.42
LINC01001-203ENST00000607448 PSMC4P43686 418 aa12.45□□□□□ -0.42
LINC01001-203ENST00000607448 SMCR8Q8TEV9 937 aaPredicted RBP12.45□□□□□ -0.42
LINC01001-203ENST00000607448 GPATCH3Q96I76 525 aa12.45□□□□□ -0.42
LINC01001-203ENST00000607448 TMX3Q96JJ7 454 aa12.45□□□□□ -0.42
LINC01001-203ENST00000607448 ANO2Q9NQ90 1003 aa12.45□□□□□ -0.42
LINC01001-203ENST00000607448 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
LINC01001-203ENST00000607448 USP17L10C9JJH3 530 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 M0R2C6 588 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 OSBPP22059 807 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 ZNF445P59923 1031 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 ZYXQ15942 572 aaKnown RBP12.44□□□□□ -0.42
LINC01001-203ENST00000607448 ABCB5Q2M3G0 1257 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 ANKRD13CQ8N6S4 541 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 ACER1Q8TDN7 264 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 SH3TC2Q8TF17 1288 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 SEC62Q99442 399 aaKnown RBP12.44□□□□□ -0.42
LINC01001-203ENST00000607448 ASCC2Q9H1I8 757 aaPredicted RBP12.44□□□□□ -0.42
LINC01001-203ENST00000607448 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
LINC01001-203ENST00000607448 POTEFA5A3E0 1075 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 USP17L12C9JPN9 530 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 USP17L21D6R901 530 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 RNF113AO15541 343 aaKnown RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 KIF22Q14807 665 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 SEPT2Q15019 361 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 MCTP1Q6DN14 999 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 POTEEQ6S8J3 1075 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 CLEC10AQ8IUN9 316 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 STRBPQ96SI9 672 aaKnown RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 PANK2Q9BZ23 570 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 EPB41L4AQ9HCS5 686 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 ATP8A2Q9NTI2 1148 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 LMBRD1Q9NUN5 540 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 GABRQQ9UN88 632 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 MYH4Q9Y623 1939 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 A0A0G2JMZ2 1700 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 GSG1L2A8MUP6 293 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 GLRX3O76003 335 aaKnown RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 MYCP01106 439 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 HSPA4P34932 840 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 MLLT1Q03111 559 aaPredicted RBP12.43□□□□□ -0.42
LINC01001-203ENST00000607448 PRKCZQ05513 592 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 C12orf60Q5U649 245 aa12.43□□□□□ -0.42
LINC01001-203ENST00000607448 CTR9Q6PD62 1173 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms