RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 KRI1Q8N9T8 703 aaKnown RBP18.27■□□□□ 0.52
CTSA-214ENST00000606788 EPSTI1Q96J88 318 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 IRS2Q9Y4H2 1338 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 POLRMTO00411 1230 aaKnown RBP18.27■□□□□ 0.52
CTSA-214ENST00000606788 RAD21O60216 631 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 COBLO75128 1261 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 PRR29P0C7W0 189 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 ATP1A3P13637 1013 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 RCSD1Q6JBY9 416 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 FOXP4Q8IVH2 680 aaPredicted RBP18.27■□□□□ 0.52
CTSA-214ENST00000606788 KCNQ5Q9NR82 932 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 ARPP21Q9UBL0 812 aaPredicted RBP18.27■□□□□ 0.52
CTSA-214ENST00000606788 SERTAD1Q9UHV2 236 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 MYH15Q9Y2K3 1946 aa18.27■□□□□ 0.51
CTSA-214ENST00000606788 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
CTSA-214ENST00000606788 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 CSRNP2Q9H175 543 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 FUT2Q10981 343 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 C12orf60Q5U649 245 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
CTSA-214ENST00000606788 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
CTSA-214ENST00000606788 STK36Q9NRP7 1315 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 BAG3O95817 575 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 METTL16Q86W50 562 aaKnown RBP18.26■□□□□ 0.51
CTSA-214ENST00000606788 DHX58Q96C10 678 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 PCDHA5Q9Y5H7 936 aa18.26■□□□□ 0.51
CTSA-214ENST00000606788 G3V3G9 751 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 MCM7P33993 719 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 CACNB3P54284 484 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 DCAF8Q5TAQ9 597 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 CACTINQ8WUQ7 758 aaKnown RBP18.25■□□□□ 0.51
CTSA-214ENST00000606788 RNF26Q9BY78 433 aaPredicted RBP18.25■□□□□ 0.51
CTSA-214ENST00000606788 GOLGA6L6A8MZA4 724 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 ONECUT3O60422 494 aaPredicted RBP18.25■□□□□ 0.51
CTSA-214ENST00000606788 KRT2P35908 639 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 PLA2G4DQ86XP0 818 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 TRMT44Q8IYL2 757 aaKnown RBP18.25■□□□□ 0.51
CTSA-214ENST00000606788 IFNKQ9P0W0 207 aa18.25■□□□□ 0.51
CTSA-214ENST00000606788 VWA3AA6NCI4 1184 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 MMP10P09238 476 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 RESP18Q5W5W9 173 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 DBNDD1Q9H9R9 158 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 PCDHAC2Q9Y5I4 1007 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 XBP1P17861 261 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 ATP2B2Q01814 1243 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 RTFDC1Q9BY42 306 aaPredicted RBP18.24■□□□□ 0.51
CTSA-214ENST00000606788 CNTNAP5Q8WYK1 1306 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 PPEF1O14829 653 aaPredicted RBP18.24■□□□□ 0.51
CTSA-214ENST00000606788 GOLGA8FQ08AF8 430 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 GOLGA8DPQ0D2H9 430 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 HEATR3Q7Z4Q2 680 aa18.24■□□□□ 0.51
CTSA-214ENST00000606788 FBXO2Q9UK22 296 aaPredicted RBP18.24■□□□□ 0.51
CTSA-214ENST00000606788 PPP6R2O75170 966 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 RILPL1Q5EBL4 403 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 PLIN2Q99541 437 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 FOXP1Q9H334 677 aaPredicted RBP18.23■□□□□ 0.51
CTSA-214ENST00000606788 NHSQ6T4R5 1651 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 THSD7AQ9UPZ6 1657 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 DUOX1Q9NRD9 1551 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 TRIM75PA6NK02 468 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 FAM196BA6NMK8 535 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 CUTAO60888 179 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 AMOTL1Q8IY63 956 aa18.23■□□□□ 0.51
CTSA-214ENST00000606788 C16orf45Q96MC5 204 aaPredicted RBP18.23■□□□□ 0.51
CTSA-214ENST00000606788 ORC4O43929 436 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 CRY2Q49AN0 593 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 KLHL10Q6JEL2 608 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 TYW1BQ6NUM6 668 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 KRBA2Q6ZNG9 492 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 UBA5Q9GZZ9 404 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 NAT10Q9H0A0 1025 aaKnown RBP18.22■□□□□ 0.51
CTSA-214ENST00000606788 A0A087X0B3 334 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 PRPF3O43395 683 aaKnown RBP18.22■□□□□ 0.51
CTSA-214ENST00000606788 PHF20Q9BVI0 1012 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 XPO4Q9C0E2 1151 aaKnown RBP18.22■□□□□ 0.51
CTSA-214ENST00000606788 TRMT1Q9NXH9 659 aaKnown RBP18.22■□□□□ 0.51
CTSA-214ENST00000606788 TAF1LQ8IZX4 1826 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
CTSA-214ENST00000606788 UQCRHLA0A096LP55 91 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 UQCRHP07919 91 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 ADRA2BP18089 450 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 SMYD4Q8IYR2 804 aaPredicted RBP18.21■□□□□ 0.51
CTSA-214ENST00000606788 UIMC1Q96RL1 719 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 HPSEQ9Y251 543 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 SCG2P13521 617 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 NLRP12P59046 1061 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 ZC3H12CQ9C0D7 883 aaKnown RBP18.21■□□□□ 0.51
CTSA-214ENST00000606788 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
CTSA-214ENST00000606788 ECM29Q5VYK3 1845 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 PTGDRQ13258 359 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 SLC35G1Q2M3R5 365 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 EYA3Q99504 573 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 TMEM47Q9BQJ4 181 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 FAM13BQ9NYF5 915 aa18.21■□□□□ 0.51
CTSA-214ENST00000606788 TTF2Q9UNY4 1162 aaKnown RBP18.21■□□□□ 0.51
CTSA-214ENST00000606788 FRMPD2Q68DX3 1309 aaPredicted RBP18.21■□□□□ 0.51
CTSA-214ENST00000606788 RASA1P20936 1047 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms