RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 LCORLQ8N3X6 602 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 CD99L2Q8TCZ2 262 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 DDRGK1Q96HY6 314 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 PARK7Q99497 189 aaKnown RBP7.06□□□□□ -1.28
FOCAD-213ENST00000604254 ARMT1Q9H993 441 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 AS3MTQ9HBK9 375 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 SERPINB13Q9UIV8 391 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 AFG3L2Q9Y4W6 797 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 TRIM17Q9Y577 477 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 CEP290O15078 2479 aa7.06□□□□□ -1.28
FOCAD-213ENST00000604254 USP17L5A8MUK1 530 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 DLL1O00548 723 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 TLR2O60603 784 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 GLRX3O76003 335 aaKnown RBP7.05□□□□□ -1.28
FOCAD-213ENST00000604254 GDF11O95390 407 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 POLR3DP05423 398 aaPredicted RBP7.05□□□□□ -1.28
FOCAD-213ENST00000604254 MX1P20591 662 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 HDAC1Q13547 482 aaPredicted RBP7.05□□□□□ -1.28
FOCAD-213ENST00000604254 KIF22Q14807 665 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 ARHGEF6Q15052 776 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 UBE3CQ15386 1083 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 LRRFIP1Q32MZ4 808 aaKnown RBP7.05□□□□□ -1.28
FOCAD-213ENST00000604254 SLFNL1Q499Z3 407 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 ANKRD45Q5TZF3 282 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 AMOTL1Q8IY63 956 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 KBTBD3Q8NAB2 608 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 ZNF280CQ8ND82 737 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 SDR42E1Q8WUS8 393 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 EHD4Q9H223 541 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 DNAJC18Q9H819 358 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 MCM9Q9NXL9 1143 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 ZBTB21Q9ULJ3 1066 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 TRIOBPQ9H2D6 2365 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 SZT2Q5T011 3432 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 HTTP42858 3142 aa7.05□□□□□ -1.28
FOCAD-213ENST00000604254 ZFYP08048 801 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 HOXB3P14651 431 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 HMGCS2P54868 508 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 SPP2Q13103 211 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 PABPC4Q13310 644 aaKnown RBP eCLIP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 MTMR2Q13614 643 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 MOGSQ13724 837 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 RRP1BQ14684 758 aaKnown RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 OTOP1Q7RTM1 612 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 METTL16Q86W50 562 aaKnown RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 PROCA1Q8NCQ7 364 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 OTUD7AQ8TE49 926 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 SMCR8Q8TEV9 937 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 FEZ1Q99689 392 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 FSD1Q9BTV5 496 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 RWDD1Q9H446 243 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 EFCC1Q9HA90 598 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 DCP1AQ9NPI6 582 aaPredicted RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 GINM1Q9NU53 330 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 TMOD4Q9NZQ9 345 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 CPA4Q9UI42 421 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 AGTPBP1Q9UPW5 1226 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 SLC45A1Q9Y2W3 748 aa7.04□□□□□ -1.28
FOCAD-213ENST00000604254 SUPT16HQ9Y5B9 1047 aaKnown RBP7.04□□□□□ -1.28
FOCAD-213ENST00000604254 ADGRA2Q96PE1 1338 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 CENPFP49454 3210 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 MPHOSPH10O00566 681 aaKnown RBP7.03□□□□□ -1.28
FOCAD-213ENST00000604254 PRKAB2O43741 272 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 GH2P01242 217 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 CHGBP05060 677 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 CYP2C8P10632 490 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 PLCD1P51178 756 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 LACTBP83111 547 aaPredicted RBP7.03□□□□□ -1.28
FOCAD-213ENST00000604254 RAB3GAP1Q15042 981 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 ABCB5Q2M3G0 1257 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 SHROOM1Q2M3G4 852 aaPredicted RBP7.03□□□□□ -1.28
FOCAD-213ENST00000604254 CERKLQ49MI3 558 aaPredicted RBP7.03□□□□□ -1.28
FOCAD-213ENST00000604254 TREML2Q5T2D2 321 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 PI4K2BQ8TCG2 481 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 APPBP2Q92624 585 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 PUS7LQ9H0K6 701 aaKnown RBP7.03□□□□□ -1.28
FOCAD-213ENST00000604254 CABP5Q9NP86 173 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 ATP8A2Q9NTI2 1148 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 SLC4A4Q9Y6R1 1079 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 MYH4Q9Y623 1939 aa7.03□□□□□ -1.28
FOCAD-213ENST00000604254 PARP14Q460N5 1801 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 GREB1LQ9C091 1923 aaPredicted RBP7.02□□□□□ -1.29
FOCAD-213ENST00000604254 C19orf81C9J6K1 198 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 USP17L10C9JJH3 530 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 RNF113AO15541 343 aaKnown RBP7.02□□□□□ -1.29
FOCAD-213ENST00000604254 FMNL1O95466 1100 aaPredicted RBP7.02□□□□□ -1.29
FOCAD-213ENST00000604254 CYP2D6P10635 497 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 OSBPP22059 807 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 SHMT1P34896 483 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 FCGRTP55899 365 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 BACE1P56817 501 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 IRX6P78412 446 aaPredicted RBP7.02□□□□□ -1.29
FOCAD-213ENST00000604254 IRX3P78415 501 aaPredicted RBP7.02□□□□□ -1.29
FOCAD-213ENST00000604254 JAG1P78504 1218 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 ZYXQ15942 572 aaKnown RBP7.02□□□□□ -1.29
FOCAD-213ENST00000604254 SH3D19Q5HYK7 790 aa7.02□□□□□ -1.29
FOCAD-213ENST00000604254 B4GALNT3Q6L9W6 998 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms