RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 NT5C2P49902 561 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 BRAPQ7Z569 592 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 SRBD1Q8N5C6 995 aaKnown RBP17.57■□□□□ 0.4
HIF3A-218ENST00000600383 NEDD1Q8NHV4 660 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 PRMT6Q96LA8 375 aaPredicted RBP17.57■□□□□ 0.4
HIF3A-218ENST00000600383 TMEM47Q9BQJ4 181 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 DLEC1Q9Y238 1755 aa17.57■□□□□ 0.4
HIF3A-218ENST00000600383 MYSM1Q5VVJ2 828 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 RSBN1LQ6PCB5 846 aaPredicted RBP17.56■□□□□ 0.4
HIF3A-218ENST00000600383 TMTC3Q6ZXV5 915 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 NIM1KQ8IY84 436 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 CEP95Q96GE4 821 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 PGBD1Q96JS3 809 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 BCS1LQ9Y276 419 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
HIF3A-218ENST00000600383 PRPF3O43395 683 aaKnown RBP17.56■□□□□ 0.4
HIF3A-218ENST00000600383 KIF5BP33176 963 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 GABPAQ06546 454 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 FUT2Q10981 343 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 SAFBQ15424 915 aaKnown RBP eCLIP17.56■□□□□ 0.4
HIF3A-218ENST00000600383 ATL3Q6DD88 541 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 BICD2Q8TD16 824 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 ANKS1AQ92625 1134 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 RCOR1Q9UKL0 485 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 CLIC4Q9Y696 253 aa17.56■□□□□ 0.4
HIF3A-218ENST00000600383 BTBD18B2RXH4 712 aa17.55■□□□□ 0.4
HIF3A-218ENST00000600383 ZNF445P59923 1031 aa17.55■□□□□ 0.4
HIF3A-218ENST00000600383 L1TD1Q5T7N2 865 aaKnown RBP17.55■□□□□ 0.4
HIF3A-218ENST00000600383 STAG2Q8N3U4 1231 aa17.55■□□□□ 0.4
HIF3A-218ENST00000600383 OGFOD1Q8N543 542 aa17.55■□□□□ 0.4
HIF3A-218ENST00000600383 VPS54Q9P1Q0 977 aa17.55■□□□□ 0.4
HIF3A-218ENST00000600383 FAM198AQ9UFP1 575 aa17.55■□□□□ 0.4
HIF3A-218ENST00000600383 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
HIF3A-218ENST00000600383 MMP1P03956 469 aa17.54■□□□□ 0.4
HIF3A-218ENST00000600383 VIL1P09327 827 aaKnown RBP17.54■□□□□ 0.4
HIF3A-218ENST00000600383 ME1P48163 572 aa17.54■□□□□ 0.4
HIF3A-218ENST00000600383 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
HIF3A-218ENST00000600383 PKN1Q16512 942 aa17.54■□□□□ 0.4
HIF3A-218ENST00000600383 DDX60LQ5H9U9 1706 aaKnown RBP17.54■□□□□ 0.4
HIF3A-218ENST00000600383 DDTLA6NHG4 134 aaPredicted RBP17.54■□□□□ 0.4
HIF3A-218ENST00000600383 MPHOSPH10O00566 681 aaKnown RBP17.54■□□□□ 0.4
HIF3A-218ENST00000600383 AKR1B1P15121 316 aa17.54■□□□□ 0.4
HIF3A-218ENST00000600383 XBP1P17861 261 aa17.54■□□□□ 0.4
HIF3A-218ENST00000600383 LIG1P18858 919 aa17.54■□□□□ 0.4
HIF3A-218ENST00000600383 DIS3L2Q8IYB7 885 aaKnown RBP17.54■□□□□ 0.4
HIF3A-218ENST00000600383 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.54■□□□□ 0.4
HIF3A-218ENST00000600383 TAOK3Q9H2K8 898 aa17.54■□□□□ 0.4
HIF3A-218ENST00000600383 FAM196BA6NMK8 535 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 GOLGA8HP0CJ92 632 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 STK38Q15208 465 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 SF3A1Q15459 793 aaKnown RBP17.53■□□□□ 0.4
HIF3A-218ENST00000600383 CCDC183Q5T5S1 534 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 RGS22Q8NE09 1264 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 JDP2Q8WYK2 163 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 IDI2Q9BXS1 227 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 GRPEL1Q9HAV7 217 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 SWAP70Q9UH65 585 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 FOCADQ5VW36 1801 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 XRCC6P12956 609 aaKnown RBP eCLIP17.53■□□□□ 0.4
HIF3A-218ENST00000600383 U2AF2P26368 475 aaKnown RBP eCLIP17.53■□□□□ 0.4
HIF3A-218ENST00000600383 RASGRP2Q7LDG7 609 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 RTEL1Q9NZ71 1219 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 HDAC9Q9UKV0 1011 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
HIF3A-218ENST00000600383 COL4A5P29400 1685 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 SHMT1P34896 483 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 CLEC10AQ8IUN9 316 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 TRIM34Q9BYJ4 488 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 VPS33BQ9H267 617 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 DHX36Q9H2U1 1008 aaKnown RBP17.52■□□□□ 0.4
HIF3A-218ENST00000600383 PI4KBQ9UBF8 816 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.4
HIF3A-218ENST00000600383 CNTNAP5Q8WYK1 1306 aa17.52■□□□□ 0.39
HIF3A-218ENST00000600383 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 TOP1P11387 765 aaKnown RBP17.51■□□□□ 0.39
HIF3A-218ENST00000600383 MRE11P49959 708 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 CXCL9Q07325 125 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 NR5A1Q13285 461 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 GRM4Q14833 912 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 DLGAP5Q15398 846 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 CAMK4Q16566 473 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 LRSAM1Q6UWE0 723 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 SH3BP5LQ7L8J4 393 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 OXER1Q8TDS5 423 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 SGIP1Q9BQI5 828 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 DACT1Q9NYF0 836 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 CD2APQ9Y5K6 639 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 TCP10L2B9ZVM9 353 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
HIF3A-218ENST00000600383 ATP2B2Q01814 1243 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 ANO1Q5XXA6 986 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 NOSTRINQ8IVI9 506 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 LINC00301Q8NCQ3 95 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 POLR3EQ9NVU0 708 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 MTMR4Q9NYA4 1195 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 CLIP2Q9UDT6 1046 aa17.51■□□□□ 0.39
HIF3A-218ENST00000600383 ISY1Q9ULR0 285 aaKnown RBP17.51■□□□□ 0.39
HIF3A-218ENST00000600383 PTGER2P43116 358 aa17.5■□□□□ 0.39
HIF3A-218ENST00000600383 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms