RNA–Protein interactions for RNA: ENST00000599459.1

TRPM4-212, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-212ENST00000599459 SHISA4Q96DD7 197 aa23.13■■□□□ 1.29
TRPM4-212ENST00000599459 KIAA1683Q9H0B3 1180 aa23.13■■□□□ 1.29
TRPM4-212ENST00000599459 RNF208Q9H0X6 261 aa23.13■■□□□ 1.29
TRPM4-212ENST00000599459 CYP2D7A0A087X1C5 515 aa23.12■■□□□ 1.29
TRPM4-212ENST00000599459 SMIM22K7EJ46 135 aa23.12■■□□□ 1.29
TRPM4-212ENST00000599459 INHAP05111 366 aa23.12■■□□□ 1.29
TRPM4-212ENST00000599459 USP14P54578 494 aa23.12■■□□□ 1.29
TRPM4-212ENST00000599459 CRBNQ96SW2 442 aa23.12■■□□□ 1.29
TRPM4-212ENST00000599459 SLC4A4Q9Y6R1 1079 aa23.12■■□□□ 1.29
TRPM4-212ENST00000599459 VCAM1P19320 739 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 POTEEQ6S8J3 1075 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 KBTBD3Q8NAB2 608 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 GPRC5AQ8NFJ5 357 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 UNC93B1Q9H1C4 597 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 RBPJLQ9UBG7 517 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 SWAP70Q9UH65 585 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 MYH8P13535 1937 aa23.11■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L12C9JPN9 530 aa23.1■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L21D6R901 530 aa23.1■■□□□ 1.29
TRPM4-212ENST00000599459 GJB1P08034 283 aa23.1■■□□□ 1.29
TRPM4-212ENST00000599459 C12orf60Q5U649 245 aa23.1■■□□□ 1.29
TRPM4-212ENST00000599459 OTUD7AQ8TE49 926 aaPredicted RBP23.1■■□□□ 1.29
TRPM4-212ENST00000599459 PAGR1Q9BTK6 254 aa23.1■■□□□ 1.29
TRPM4-212ENST00000599459 A0A1W2PRG0 241 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L15C9J2P7 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L13C9JLJ4 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L11C9JVI0 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L18D6R9N7 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L22D6RA61 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L17D6RBQ6 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L19D6RCP7 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L20D6RJB6 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 GJA8P48165 433 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 ERVK-9P63128 1117 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 ERVK-24P63145 666 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 USP17L24Q0WX57 530 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 AMOTL1Q8IY63 956 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 GTF3C2Q8WUA4 911 aaPredicted RBP23.09■■□□□ 1.29
TRPM4-212ENST00000599459 DDRGK1Q96HY6 314 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 GJD2Q9UKL4 321 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 PLXNB2O15031 1838 aa23.09■■□□□ 1.29
TRPM4-212ENST00000599459 AKR1B1P15121 316 aa23.08■■□□□ 1.29
TRPM4-212ENST00000599459 Q3C1V9 767 aa23.08■■□□□ 1.29
TRPM4-212ENST00000599459 CTR9Q6PD62 1173 aa23.08■■□□□ 1.29
TRPM4-212ENST00000599459 CATSPERGQ6ZRH7 1159 aa23.08■■□□□ 1.29
TRPM4-212ENST00000599459 TMEM179Q6ZVK1 233 aa23.08■■□□□ 1.29
TRPM4-212ENST00000599459 NKX2-3Q8TAU0 364 aa23.08■■□□□ 1.29
TRPM4-212ENST00000599459 STRBPQ96SI9 672 aaKnown RBP23.08■■□□□ 1.29
TRPM4-212ENST00000599459 TTC41PQ6P2S7 1318 aa23.08■■□□□ 1.28
TRPM4-212ENST00000599459 CDK8P49336 464 aa23.07■■□□□ 1.28
TRPM4-212ENST00000599459 CLEC10AQ8IUN9 316 aa23.07■■□□□ 1.28
TRPM4-212ENST00000599459 PI4K2BQ8TCG2 481 aa23.07■■□□□ 1.28
TRPM4-212ENST00000599459 APPBP2Q92624 585 aa23.07■■□□□ 1.28
TRPM4-212ENST00000599459 OSBP2Q969R2 916 aa23.07■■□□□ 1.28
TRPM4-212ENST00000599459 PORCNQ9H237 461 aa23.07■■□□□ 1.28
TRPM4-212ENST00000599459 RPAP3Q9H6T3 665 aaPredicted RBP23.07■■□□□ 1.28
TRPM4-212ENST00000599459 RNF113AO15541 343 aaKnown RBP23.06■■□□□ 1.28
TRPM4-212ENST00000599459 C16orf86Q6ZW13 317 aa23.06■■□□□ 1.28
TRPM4-212ENST00000599459 U2AF1L4Q8WU68 220 aaKnown RBP23.06■■□□□ 1.28
TRPM4-212ENST00000599459 CNMDO75829 334 aa23.05■■□□□ 1.28
TRPM4-212ENST00000599459 MAPK4P31152 587 aa23.05■■□□□ 1.28
TRPM4-212ENST00000599459 ARPP21Q9UBL0 812 aaPredicted RBP23.05■■□□□ 1.28
TRPM4-212ENST00000599459 GSG1L2A8MUP6 293 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 ERC2O15083 957 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 HMGCRP04035 888 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 ZFYP08048 801 aaPredicted RBP23.04■■□□□ 1.28
TRPM4-212ENST00000599459 CYP2B6P20813 491 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 ICA1Q05084 483 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 SIAH1Q8IUQ4 282 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 CCAR1Q8IX12 1150 aaKnown RBP23.04■■□□□ 1.28
TRPM4-212ENST00000599459 SOCS4Q8WXH5 440 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 PAK6Q9NQU5 681 aaPredicted RBP23.04■■□□□ 1.28
TRPM4-212ENST00000599459 RABGAP1Q9Y3P9 1069 aa23.04■■□□□ 1.28
TRPM4-212ENST00000599459 SPDYE16A6NNV3 312 aaPredicted RBP23.03■■□□□ 1.28
TRPM4-212ENST00000599459 M0R2C6 588 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 GPAA1O43292 621 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 GLRX3O76003 335 aaKnown RBP23.03■■□□□ 1.28
TRPM4-212ENST00000599459 MX1P20591 662 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 TRIM32Q13049 653 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 KIAA1755Q5JYT7 1200 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 GPR142Q7Z601 462 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 TRIB2Q92519 343 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 CCDC17Q96LX7 622 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 DEFB118Q96PH6 123 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 NUDT12Q9BQG2 462 aa23.03■■□□□ 1.28
TRPM4-212ENST00000599459 SGPL1O95470 568 aa23.02■■□□□ 1.28
TRPM4-212ENST00000599459 LBX2Q6XYB7 198 aa23.02■■□□□ 1.28
TRPM4-212ENST00000599459 UBE2Q1Q7Z7E8 422 aa23.02■■□□□ 1.28
TRPM4-212ENST00000599459 TANGO6Q9C0B7 1094 aa23.02■■□□□ 1.28
TRPM4-212ENST00000599459 ARHGEF10LQ9HCE6 1279 aa23.02■■□□□ 1.28
TRPM4-212ENST00000599459 BTBD7Q9P203 1132 aa23.02■■□□□ 1.28
TRPM4-212ENST00000599459 SBK1Q52WX2 424 aa23.01■■□□□ 1.27
TRPM4-212ENST00000599459 ANKRD45Q5TZF3 282 aa23.01■■□□□ 1.27
TRPM4-212ENST00000599459 PLEKHH3Q7Z736 793 aa23.01■■□□□ 1.27
TRPM4-212ENST00000599459 FSD1Q9BTV5 496 aa23.01■■□□□ 1.27
TRPM4-212ENST00000599459 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.01■■□□□ 1.27
TRPM4-212ENST00000599459 EPB41L4AQ9HCS5 686 aaPredicted RBP23.01■■□□□ 1.27
TRPM4-212ENST00000599459 SALL3Q9BXA9 1300 aa23.01■■□□□ 1.27
TRPM4-212ENST00000599459 CCNA1P78396 465 aa23■■□□□ 1.27
TRPM4-212ENST00000599459 HDAC1Q13547 482 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms