RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 VCAM1P19320 739 aa17.85■□□□□ 0.45
IRF3-223ENST00000599223 RAB3GAP1Q15042 981 aa17.85■□□□□ 0.45
IRF3-223ENST00000599223 MORN1Q5T089 497 aa17.85■□□□□ 0.45
IRF3-223ENST00000599223 GPR142Q7Z601 462 aa17.85■□□□□ 0.45
IRF3-223ENST00000599223 EDC3Q96F86 508 aaKnown RBP17.85■□□□□ 0.45
IRF3-223ENST00000599223 HMX1Q9NP08 348 aaPredicted RBP17.85■□□□□ 0.45
IRF3-223ENST00000599223 COL6A3P12111 3177 aa17.85■□□□□ 0.45
IRF3-223ENST00000599223 TCRBV5S4A2TA0A5A2 114 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 GABPAQ06546 454 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 SLFNL1Q499Z3 407 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 NECAB2Q7Z6G3 386 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 CERS3Q8IU89 383 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 ANKLE1Q8NAG6 615 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 NUDT12Q9BQG2 462 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 ZNF236Q9UL36 1845 aa17.84■□□□□ 0.45
IRF3-223ENST00000599223 PFASO15067 1338 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 MAGEB6P1A0A0J9YX57 407 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 SOX1O00570 391 aaPredicted RBP17.83■□□□□ 0.44
IRF3-223ENST00000599223 XRCC5P13010 732 aaKnown RBP17.83■□□□□ 0.44
IRF3-223ENST00000599223 ZKSCAN1P17029 563 aaPredicted RBP17.83■□□□□ 0.44
IRF3-223ENST00000599223 MAPK4P31152 587 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 ABCB5Q2M3G0 1257 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 CERKLQ49MI3 558 aaPredicted RBP17.83■□□□□ 0.44
IRF3-223ENST00000599223 C7orf61Q8IZ16 206 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 LCORLQ8N3X6 602 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 SDR42E1Q8WUS8 393 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 KIAA1683Q9H0B3 1180 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 OGDHLQ9ULD0 1010 aa17.83■□□□□ 0.44
IRF3-223ENST00000599223 ZNF532Q9HCE3 1301 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 GOLIM4O00461 696 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 CYP2D6P10635 497 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 CCND3P30281 292 aaPredicted RBP17.82■□□□□ 0.44
IRF3-223ENST00000599223 CACNB2Q08289 660 aaPredicted RBP17.82■□□□□ 0.44
IRF3-223ENST00000599223 PDE3AQ14432 1141 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 SEPT2Q15019 361 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 SLC9C2Q5TAH2 1124 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 TTC6Q86TZ1 520 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 SLC44A5Q8NCS7 719 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 GTF3C2Q8WUA4 911 aaPredicted RBP17.82■□□□□ 0.44
IRF3-223ENST00000599223 DNAJC2Q99543 621 aaKnown RBP17.82■□□□□ 0.44
IRF3-223ENST00000599223 APBA2Q99767 749 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 BTBD7Q9P203 1132 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 STAP2Q9UGK3 403 aa17.82■□□□□ 0.44
IRF3-223ENST00000599223 SPDYE16A6NNV3 312 aaPredicted RBP17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L15C9J2P7 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L13C9JLJ4 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L11C9JVI0 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L18D6R9N7 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 SMIM22K7EJ46 135 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 CHGBP05060 677 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 CAPN2P17655 700 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 TMED8Q6PL24 325 aaPredicted RBP17.81■□□□□ 0.44
IRF3-223ENST00000599223 CATSPERGQ6ZRH7 1159 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 PLEKHH3Q7Z736 793 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 NBPF3Q9H094 633 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 BCL11AQ9H165 835 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 RPAP3Q9H6T3 665 aaPredicted RBP17.81■□□□□ 0.44
IRF3-223ENST00000599223 ZBTB40Q9NUA8 1239 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 FLRT1Q9NZU1 646 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 ZMYND8Q9ULU4 1186 aaPredicted RBP17.81■□□□□ 0.44
IRF3-223ENST00000599223 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 RABGAP1Q9Y3P9 1069 aa17.81■□□□□ 0.44
IRF3-223ENST00000599223 COL11A1P12107 1806 aaPredicted RBP17.8■□□□□ 0.44
IRF3-223ENST00000599223 A0A1W2PRG0 241 aa17.8■□□□□ 0.44
IRF3-223ENST00000599223 RGS2P41220 211 aa17.8■□□□□ 0.44
IRF3-223ENST00000599223 TTF1Q15361 905 aaPredicted RBP17.8■□□□□ 0.44
IRF3-223ENST00000599223 HSP90AB4PQ58FF6 505 aa17.8■□□□□ 0.44
IRF3-223ENST00000599223 KIF1BPQ96EK5 621 aa17.8■□□□□ 0.44
IRF3-223ENST00000599223 C11orf49Q9H6J7 331 aa17.8■□□□□ 0.44
IRF3-223ENST00000599223 DCP1AQ9NPI6 582 aaPredicted RBP17.8■□□□□ 0.44
IRF3-223ENST00000599223 MCM9Q9NXL9 1143 aa17.8■□□□□ 0.44
IRF3-223ENST00000599223 POLR3DP05423 398 aaPredicted RBP17.79■□□□□ 0.44
IRF3-223ENST00000599223 USP14P54578 494 aa17.79■□□□□ 0.44
IRF3-223ENST00000599223 MAP2K5Q13163 448 aa17.79■□□□□ 0.44
IRF3-223ENST00000599223 KIAA1755Q5JYT7 1200 aa17.79■□□□□ 0.44
IRF3-223ENST00000599223 LHX8Q68G74 356 aa17.79■□□□□ 0.44
IRF3-223ENST00000599223 LBX2Q6XYB7 198 aa17.79■□□□□ 0.44
IRF3-223ENST00000599223 CLASRPQ8N2M8 674 aaKnown RBP17.79■□□□□ 0.44
IRF3-223ENST00000599223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.79■□□□□ 0.44
IRF3-223ENST00000599223 LRCH3Q96II8 777 aa17.79■□□□□ 0.44
IRF3-223ENST00000599223 CRNKL1Q9BZJ0 848 aaKnown RBP17.79■□□□□ 0.44
IRF3-223ENST00000599223 ARMT1Q9H993 441 aa17.79■□□□□ 0.44
IRF3-223ENST00000599223 LAMA2P24043 3122 aaKnown RBP17.78■□□□□ 0.44
IRF3-223ENST00000599223 PRKAB2O43741 272 aa17.78■□□□□ 0.44
IRF3-223ENST00000599223 COL6A1P12109 1028 aa17.78■□□□□ 0.44
IRF3-223ENST00000599223 SYN1P17600 705 aa17.78■□□□□ 0.44
IRF3-223ENST00000599223 CCAR1Q8IX12 1150 aaKnown RBP17.78■□□□□ 0.44
IRF3-223ENST00000599223 DYNLL2Q96FJ2 89 aa17.78■□□□□ 0.44
IRF3-223ENST00000599223 GDF15Q99988 308 aa17.78■□□□□ 0.44
IRF3-223ENST00000599223 GREB1LQ9C091 1923 aaPredicted RBP17.78■□□□□ 0.44
IRF3-223ENST00000599223 A0A1W2PPC1 479 aa17.77■□□□□ 0.44
IRF3-223ENST00000599223 MBD4O95243 580 aa17.77■□□□□ 0.44
IRF3-223ENST00000599223 IFIT2P09913 472 aaKnown RBP17.77■□□□□ 0.44
IRF3-223ENST00000599223 GRB14Q14449 540 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms