RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-208ENST00000596365 MRPS5P82675 430 aaKnown RBP10.61□□□□□ -0.71
LINC00649-208ENST00000596365 MORN1Q5T089 497 aa10.61□□□□□ -0.71
LINC00649-208ENST00000596365 POTEEQ6S8J3 1075 aa10.61□□□□□ -0.71
LINC00649-208ENST00000596365 PLEKHH3Q7Z736 793 aa10.61□□□□□ -0.71
LINC00649-208ENST00000596365 SUCLG2Q96I99 432 aa10.61□□□□□ -0.71
LINC00649-208ENST00000596365 RNPC3Q96LT9 517 aaKnown RBP10.61□□□□□ -0.71
LINC00649-208ENST00000596365 AS3MTQ9HBK9 375 aa10.61□□□□□ -0.71
LINC00649-208ENST00000596365 DDX20Q9UHI6 824 aaKnown RBP10.61□□□□□ -0.71
LINC00649-208ENST00000596365 RFX7Q2KHR2 1363 aa10.61□□□□□ -0.71
LINC00649-208ENST00000596365 SALL1Q9NSC2 1324 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 TCF20Q9UGU0 1960 aaKnown RBP10.6□□□□□ -0.71
LINC00649-208ENST00000596365 USP17L5A8MUK1 530 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 SLURP2P0DP57 97 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 SLC5A1P13866 664 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 CNGA1P29973 690 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 HOXA7P31268 230 aaPredicted RBP10.6□□□□□ -0.71
LINC00649-208ENST00000596365 HERVK_113P62684 666 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 PLCB2Q00722 1185 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 SLC39A5Q6ZMH5 540 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 GPR142Q7Z601 462 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 GTF3C2Q8WUA4 911 aaPredicted RBP10.6□□□□□ -0.71
LINC00649-208ENST00000596365 KAZALD1Q96I82 304 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 GAS2L1Q99501 681 aaPredicted RBP10.6□□□□□ -0.71
LINC00649-208ENST00000596365 P2RX7Q99572 595 aaKnown RBP10.6□□□□□ -0.71
LINC00649-208ENST00000596365 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00649-208ENST00000596365 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
LINC00649-208ENST00000596365 TXNRD2Q9NNW7 524 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 HCN4Q9Y3Q4 1203 aa10.6□□□□□ -0.71
LINC00649-208ENST00000596365 GAKO14976 1311 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 KBTBD13C9JR72 458 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 DPYSL4O14531 572 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 GLRX3O76003 335 aaKnown RBP10.59□□□□□ -0.71
LINC00649-208ENST00000596365 DNAJB2P25686 324 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 PBX2P40425 430 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 ERVK-9P63128 1117 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 ERVK-24P63145 666 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 PICALMQ13492 652 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 AKNAD1Q5T1N1 836 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 SLF2Q8IX21 1173 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 ARRDC4Q8NCT1 418 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 PPM1EQ8WY54 764 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 LPIN2Q92539 896 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 EDC3Q96F86 508 aaKnown RBP10.59□□□□□ -0.71
LINC00649-208ENST00000596365 SRCIN1Q9C0H9 1055 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 ZNF576Q9H609 170 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 DDX4Q9NQI0 724 aaKnown RBP10.59□□□□□ -0.71
LINC00649-208ENST00000596365 PDLIM7Q9NR12 457 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 GNL3LQ9NVN8 582 aaKnown RBP10.59□□□□□ -0.71
LINC00649-208ENST00000596365 TMOD4Q9NZQ9 345 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 PLXNA1Q9UIW2 1896 aa10.59□□□□□ -0.71
LINC00649-208ENST00000596365 UTYO14607 1347 aa10.58□□□□□ -0.71
LINC00649-208ENST00000596365 CHD9Q3L8U1 2897 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.58□□□□□ -0.72
LINC00649-208ENST00000596365 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.58□□□□□ -0.72
LINC00649-208ENST00000596365 PEX10O60683 326 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 CAP2P40123 477 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 SNX17Q15036 470 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 E2F4Q16254 413 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 RABL6Q3YEC7 729 aaPredicted RBP10.58□□□□□ -0.72
LINC00649-208ENST00000596365 TRIM60Q495X7 471 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
LINC00649-208ENST00000596365 ZGPATQ8N5A5 531 aaKnown RBP10.58□□□□□ -0.72
LINC00649-208ENST00000596365 ZNF454Q8N9F8 522 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 PORCNQ9H237 461 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 BICC1Q9H694 974 aaKnown RBP10.58□□□□□ -0.72
LINC00649-208ENST00000596365 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 DENND2AQ9ULE3 1009 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 REV3LO60673 3130 aa10.58□□□□□ -0.72
LINC00649-208ENST00000596365 TRIM43BA6NCK2 446 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 FAM196BA6NMK8 535 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 SEMA3EO15041 775 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 VAMP4O75379 141 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 BACE1P56817 501 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 ATP2B2Q01814 1243 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 MTMR2Q13614 643 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 Q3C1V9 767 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 SLC4A10Q6U841 1118 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 DZIP1Q86YF9 867 aaKnown RBP10.57□□□□□ -0.72
LINC00649-208ENST00000596365 TRIM43Q96BQ3 446 aaPredicted RBP10.57□□□□□ -0.72
LINC00649-208ENST00000596365 TIFAQ96CG3 184 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 PAGR1Q9BTK6 254 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 WDR18Q9BV38 432 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 IL16Q14005 1332 aa10.57□□□□□ -0.72
LINC00649-208ENST00000596365 SLC15A5A6NIM6 579 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 C19orf81C9J6K1 198 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 ARHGAP33O14559 1287 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 NBPF7P0C2Y1 421 aaPredicted RBP10.56□□□□□ -0.72
LINC00649-208ENST00000596365 BTDP43251 543 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 FOSBP53539 338 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 CCNA1P78396 465 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 CCDC27Q2M243 656 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 C1orf53Q5VUE5 145 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 ANKRD44Q8N8A2 993 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 FLRT1Q9NZU1 646 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 TACC3Q9Y6A5 838 aa10.56□□□□□ -0.72
LINC00649-208ENST00000596365 MUC6Q6W4X9 2439 aa10.55□□□□□ -0.72
LINC00649-208ENST00000596365 LSM11P83369 360 aaKnown RBP eCLIP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms