RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 FAM47AQ5JRC9 791 aa24.59■■□□□ 1.53
DNMT1-227ENST00000592342 PRRT2Q7Z6L0 340 aaPredicted RBP24.59■■□□□ 1.53
DNMT1-227ENST00000592342 IFNL1Q8IU54 200 aa24.59■■□□□ 1.53
DNMT1-227ENST00000592342 KANSL2Q9H9L4 492 aa24.59■■□□□ 1.53
DNMT1-227ENST00000592342 ARHGEF10LQ9HCE6 1279 aa24.59■■□□□ 1.53
DNMT1-227ENST00000592342 WBP1LQ9NX94 342 aa24.59■■□□□ 1.53
DNMT1-227ENST00000592342 TMOD4Q9NZQ9 345 aa24.59■■□□□ 1.53
DNMT1-227ENST00000592342 C19orf81C9J6K1 198 aa24.58■■□□□ 1.53
DNMT1-227ENST00000592342 ALDH1A1P00352 501 aa24.58■■□□□ 1.53
DNMT1-227ENST00000592342 HMGCS2P54868 508 aa24.58■■□□□ 1.53
DNMT1-227ENST00000592342 BACE1P56817 501 aa24.58■■□□□ 1.53
DNMT1-227ENST00000592342 NBPF3Q9H094 633 aa24.58■■□□□ 1.53
DNMT1-227ENST00000592342 FGRP09769 529 aa24.57■■□□□ 1.52
DNMT1-227ENST00000592342 USP14P54578 494 aa24.57■■□□□ 1.52
DNMT1-227ENST00000592342 ZYXQ15942 572 aaKnown RBP24.57■■□□□ 1.52
DNMT1-227ENST00000592342 CLEC10AQ8IUN9 316 aa24.57■■□□□ 1.52
DNMT1-227ENST00000592342 NEDD1Q8NHV4 660 aa24.57■■□□□ 1.52
DNMT1-227ENST00000592342 SH2D4AQ9H788 454 aa24.57■■□□□ 1.52
DNMT1-227ENST00000592342 TACC3Q9Y6A5 838 aa24.57■■□□□ 1.52
DNMT1-227ENST00000592342 IGF2BP3O00425 579 aaKnown RBP eCLIP24.56■■□□□ 1.52
DNMT1-227ENST00000592342 REC8O95072 547 aa24.56■■□□□ 1.52
DNMT1-227ENST00000592342 CYP21A2P08686 494 aa24.56■■□□□ 1.52
DNMT1-227ENST00000592342 USP17L2Q6R6M4 530 aa24.56■■□□□ 1.52
DNMT1-227ENST00000592342 ACER1Q8TDN7 264 aa24.56■■□□□ 1.52
DNMT1-227ENST00000592342 ESR2Q92731 530 aa24.56■■□□□ 1.52
DNMT1-227ENST00000592342 PTPN18Q99952 460 aa24.56■■□□□ 1.52
DNMT1-227ENST00000592342 RNF186Q9NXI6 227 aa24.56■■□□□ 1.52
DNMT1-227ENST00000592342 BTBD19C9JJ37 291 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 CA12O43570 354 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 TRPA1O75762 1119 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 HSPA1AP0DMV8 641 aaKnown RBP24.55■■□□□ 1.52
DNMT1-227ENST00000592342 HSPA1BP0DMV9 641 aaKnown RBP24.55■■□□□ 1.52
DNMT1-227ENST00000592342 TRDNQ13061 729 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 SH3D19Q5HYK7 790 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 ANKRD23Q86SG2 305 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 PROCA1Q8NCQ7 364 aaPredicted RBP24.55■■□□□ 1.52
DNMT1-227ENST00000592342 KRT23Q9C075 422 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 CNNM2Q9H8M5 875 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 NEDD4P46934 1319 aa24.55■■□□□ 1.52
DNMT1-227ENST00000592342 PHIPQ8WWQ0 1821 aa24.54■■□□□ 1.52
DNMT1-227ENST00000592342 EEF2P13639 858 aaKnown RBP24.54■■□□□ 1.52
DNMT1-227ENST00000592342 PPP4R3BQ5MIZ7 849 aa24.54■■□□□ 1.52
DNMT1-227ENST00000592342 RNF20Q5VTR2 975 aa24.54■■□□□ 1.52
DNMT1-227ENST00000592342 FAM43AQ8N2R8 423 aa24.54■■□□□ 1.52
DNMT1-227ENST00000592342 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.54■■□□□ 1.52
DNMT1-227ENST00000592342 KIAA1683Q9H0B3 1180 aa24.54■■□□□ 1.52
DNMT1-227ENST00000592342 NT5C2P49902 561 aa24.53■■□□□ 1.52
DNMT1-227ENST00000592342 DGKZQ13574 1117 aa24.53■■□□□ 1.52
DNMT1-227ENST00000592342 TAF1CQ15572 869 aaPredicted RBP24.53■■□□□ 1.52
DNMT1-227ENST00000592342 CEP95Q96GE4 821 aa24.53■■□□□ 1.52
DNMT1-227ENST00000592342 SAGE1Q9NXZ1 904 aa24.53■■□□□ 1.52
DNMT1-227ENST00000592342 PLIN4Q96Q06 1357 aa24.53■■□□□ 1.52
DNMT1-227ENST00000592342 LAMA4Q16363 1823 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 A0A1W2PRG0 241 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 B4E1Z4 1266 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 PDHXO00330 501 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 RAD21O60216 631 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 PABPC4Q13310 644 aaKnown RBP eCLIP24.52■■□□□ 1.52
DNMT1-227ENST00000592342 MOGSQ13724 837 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 ZCCHC17Q9NP64 241 aaKnown RBP24.52■■□□□ 1.52
DNMT1-227ENST00000592342 MTMR4Q9NYA4 1195 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 NYAP2Q9P242 653 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 CLIP2Q9UDT6 1046 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 AGTPBP1Q9UPW5 1226 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 TMX2Q9Y320 296 aa24.52■■□□□ 1.52
DNMT1-227ENST00000592342 IGKV6D-41A0A0C4DH26 115 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 SLC27A2O14975 620 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 KDM4AO75164 1064 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 TTLL1O95922 423 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 NECTIN1Q15223 517 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 CREB3L3Q68CJ9 461 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 GPAT2Q6NUI2 795 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 RALYLQ86SE5 291 aaKnown RBP24.51■■□□□ 1.51
DNMT1-227ENST00000592342 EMILIN3Q9NT22 766 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 STX8Q9UNK0 236 aa24.51■■□□□ 1.51
DNMT1-227ENST00000592342 TREML2Q5T2D2 321 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 IQCA1Q86XH1 822 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 SIAH1Q8IUQ4 282 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 NCOA7Q8NI08 942 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 ZFYVE28Q9HCC9 887 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 GOPCQ9HD26 462 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 TSKSQ9UJT2 592 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 CEP350Q5VT06 3117 aa24.5■■□□□ 1.51
DNMT1-227ENST00000592342 E7EWF7 191 aa24.49■■□□□ 1.51
DNMT1-227ENST00000592342 NMT2O60551 498 aa24.49■■□□□ 1.51
DNMT1-227ENST00000592342 EIF5BO60841 1220 aaKnown RBP24.49■■□□□ 1.51
DNMT1-227ENST00000592342 TBC1D8O95759 1140 aa24.49■■□□□ 1.51
DNMT1-227ENST00000592342 OSBPP22059 807 aa24.49■■□□□ 1.51
DNMT1-227ENST00000592342 C12orf42Q96LP6 360 aa24.49■■□□□ 1.51
DNMT1-227ENST00000592342 PARK7Q99497 189 aaKnown RBP24.49■■□□□ 1.51
DNMT1-227ENST00000592342 PNMA3Q9UL41 463 aa24.49■■□□□ 1.51
DNMT1-227ENST00000592342 SLC45A1Q9Y2W3 748 aa24.49■■□□□ 1.51
DNMT1-227ENST00000592342 FOXN1O15353 648 aa24.48■■□□□ 1.51
DNMT1-227ENST00000592342 ZKSCAN1P17029 563 aaPredicted RBP24.48■■□□□ 1.51
DNMT1-227ENST00000592342 CCDC178Q5BJE1 867 aa24.48■■□□□ 1.51
DNMT1-227ENST00000592342 VCPKMTQ9H867 229 aa24.48■■□□□ 1.51
DNMT1-227ENST00000592342 IL17RBQ9NRM6 502 aa24.48■■□□□ 1.51
DNMT1-227ENST00000592342 TCP11L1Q9NUJ3 509 aa24.48■■□□□ 1.51
DNMT1-227ENST00000592342 IRX3P78415 501 aaPredicted RBP24.47■■□□□ 1.51
DNMT1-227ENST00000592342 CRHR2Q13324 411 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms