RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DENND2AQ9ULE3 1009 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 DUSP10Q9Y6W6 482 aa17.1■□□□□ 0.33
CIRBP-228ENST00000590347 ZNF609O15014 1411 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 YEATS4O95619 227 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 GYPCP04921 128 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 NAA35Q5VZE5 725 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 SPDL1Q96EA4 605 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 RUFY1Q96T51 708 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 RBM5P52756 815 aaKnown RBP eCLIP17.09■□□□□ 0.338e-8■□□□□ 9.6
CIRBP-228ENST00000590347 AMPD2Q01433 879 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 NR1I3Q14994 352 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
CIRBP-228ENST00000590347 MACROD2A1Z1Q3 448 aa17.08■□□□□ 0.33
CIRBP-228ENST00000590347 MFAP3LO75121 409 aa17.08■□□□□ 0.33
CIRBP-228ENST00000590347 KIF23Q02241 960 aaPredicted RBP17.08■□□□□ 0.33
CIRBP-228ENST00000590347 RASGRP2Q7LDG7 609 aa17.08■□□□□ 0.33
CIRBP-228ENST00000590347 ESYT3A0FGR9 886 aa17.08■□□□□ 0.32
CIRBP-228ENST00000590347 SMCR8Q8TEV9 937 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-228ENST00000590347 ALDH8A1Q9H2A2 487 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-228ENST00000590347 IRAK4Q9NWZ3 460 aa17.08■□□□□ 0.32
CIRBP-228ENST00000590347 DBNLQ9UJU6 430 aaKnown RBP17.08■□□□□ 0.32
CIRBP-228ENST00000590347 MAPK8IP1Q9UQF2 711 aa17.08■□□□□ 0.32
CIRBP-228ENST00000590347 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
CIRBP-228ENST00000590347 E7EVH7 732 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
CIRBP-228ENST00000590347 CCNI2Q6ZMN8 369 aaPredicted RBP17.07■□□□□ 0.32
CIRBP-228ENST00000590347 DBNDD2Q9BQY9 259 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 TPX2Q9ULW0 747 aaKnown RBP17.07■□□□□ 0.32
CIRBP-228ENST00000590347 ZNF18P17022 549 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 SLC39A14Q15043 492 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 VPS37DQ86XT2 251 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 JMYQ8N9B5 988 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 SALL1Q9NSC2 1324 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 FMN2Q9NZ56 1722 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 LRRC1Q9BTT6 524 aa17.07■□□□□ 0.32
CIRBP-228ENST00000590347 TRDNQ13061 729 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 ZNF483Q8TF39 744 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-228ENST00000590347 JAKMIP2Q96AA8 810 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 MYL10Q9BUA6 226 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 VIPAS39Q9H9C1 493 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 BAIAP2L1Q9UHR4 511 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 SAR1BQ9Y6B6 198 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 MPHOSPH10O00566 681 aaKnown RBP17.06■□□□□ 0.32
CIRBP-228ENST00000590347 CAND2O75155 1236 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 FSBPO95073 299 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
CIRBP-228ENST00000590347 NNTQ13423 1086 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 SNCBQ16143 134 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 MCMDC2Q4G0Z9 681 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
CIRBP-228ENST00000590347 ZNF473Q8WTR7 871 aaKnown RBP17.06■□□□□ 0.32
CIRBP-228ENST00000590347 XAGE2Q96GT9 111 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 TAB2Q9NYJ8 693 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
CIRBP-228ENST00000590347 ZSCAN5CA6NGD5 496 aaPredicted RBP17.05■□□□□ 0.32
CIRBP-228ENST00000590347 CD44P16070 742 aaKnown RBP17.05■□□□□ 0.32
CIRBP-228ENST00000590347 LSP1P33241 339 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 DDR1Q08345 913 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 KCNB1Q14721 858 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 POSTNQ15063 836 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 CCDC122Q5T0U0 273 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 NEUROD6Q96NK8 337 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 RGPD1P0DJD0 1748 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 MYL6BP14649 208 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 KRT9P35527 623 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 GUCY2FP51841 1108 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 ATL3Q6DD88 541 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 CYB5D1Q6P9G0 228 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 PARP9Q8IXQ6 854 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 KAZALD1Q96I82 304 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 PANX2Q96RD6 677 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 ZCWPW1Q9H0M4 648 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 REXO2Q9Y3B8 237 aaKnown RBP17.05■□□□□ 0.32
CIRBP-228ENST00000590347 SH3BP1Q9Y3L3 701 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 NWD1Q149M9 1564 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 GOLGA6L7A0A1B0GV03 622 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
CIRBP-228ENST00000590347 TFCP2Q12800 502 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 MYO1EQ12965 1108 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 B4GALNT4Q76KP1 1039 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 MAEAQ7L5Y9 396 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 FMNL3Q8IVF7 1028 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 STAG1Q8WVM7 1258 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 RAPGEF4Q8WZA2 1011 aa17.05■□□□□ 0.32
CIRBP-228ENST00000590347 EZRP15311 586 aaKnown RBP17.04■□□□□ 0.32
CIRBP-228ENST00000590347 CYP27A1Q02318 531 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 MSL3Q8N5Y2 521 aaKnown RBP17.04■□□□□ 0.32
CIRBP-228ENST00000590347 L3MBTL1Q9Y468 752 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 CHD2O14647 1828 aaKnown RBP17.04■□□□□ 0.32
CIRBP-228ENST00000590347 DNM1LO00429 736 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 KIF4AO95239 1232 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 EXOSC10Q01780 885 aaKnown RBP17.04■□□□□ 0.32
CIRBP-228ENST00000590347 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 TBC1D22AQ8WUA7 517 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 CCT8L2Q96SF2 557 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 ALG1Q9BT22 464 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 YIPF3Q9GZM5 350 aa17.04■□□□□ 0.32
CIRBP-228ENST00000590347 VCPKMTQ9H867 229 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms