RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 GREB1LQ9C091 1923 aaPredicted RBP22.26■■□□□ 1.15
MBD1-223ENST00000590215 ORC4O43929 436 aa22.26■■□□□ 1.15
MBD1-223ENST00000590215 HSPA8P11142 646 aaKnown RBP22.26■■□□□ 1.15
MBD1-223ENST00000590215 PCP11498 1178 aaKnown RBP22.26■■□□□ 1.15
MBD1-223ENST00000590215 CTCFP49711 727 aaPredicted RBP22.26■■□□□ 1.15
MBD1-223ENST00000590215 PTH1RQ03431 593 aa22.26■■□□□ 1.15
MBD1-223ENST00000590215 MTMR2Q13614 643 aa22.26■■□□□ 1.15
MBD1-223ENST00000590215 SIAH1Q8IUQ4 282 aa22.26■■□□□ 1.15
MBD1-223ENST00000590215 KIAA1683Q9H0B3 1180 aa22.26■■□□□ 1.15
MBD1-223ENST00000590215 KANSL2Q9H9L4 492 aa22.26■■□□□ 1.15
MBD1-223ENST00000590215 SLC45A1Q9Y2W3 748 aa22.26■■□□□ 1.15
MBD1-223ENST00000590215 PLIN4Q96Q06 1357 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 IGKV6D-41A0A0C4DH26 115 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 HMGCS2P54868 508 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 NOM1Q5C9Z4 860 aaKnown RBP22.25■■□□□ 1.15
MBD1-223ENST00000590215 NEDD1Q8NHV4 660 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 ACER1Q8TDN7 264 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 STAG1Q8WVM7 1258 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 MAP4K1Q92918 833 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 C12orf42Q96LP6 360 aa22.25■■□□□ 1.15
MBD1-223ENST00000590215 A0A1W2PRG0 241 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 ZNF213O14771 459 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 USP14P54578 494 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 HAND2P61296 217 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 ICA1Q05084 483 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 AKNAD1Q5T1N1 836 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 CASC1Q6TDU7 716 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 LSG1Q9H089 658 aaKnown RBP22.24■■□□□ 1.15
MBD1-223ENST00000590215 INCENPQ9NQS7 918 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 AGTPBP1Q9UPW5 1226 aa22.24■■□□□ 1.15
MBD1-223ENST00000590215 LOC285556D6RIA3 1793 aa22.23■■□□□ 1.15
MBD1-223ENST00000590215 NT5C2P49902 561 aa22.23■■□□□ 1.15
MBD1-223ENST00000590215 IMMTQ16891 758 aaKnown RBP22.23■■□□□ 1.15
MBD1-223ENST00000590215 USP17L2Q6R6M4 530 aa22.23■■□□□ 1.15
MBD1-223ENST00000590215 GADL1Q6ZQY3 521 aa22.23■■□□□ 1.15
MBD1-223ENST00000590215 TBC1D10CQ8IV04 446 aa22.23■■□□□ 1.15
MBD1-223ENST00000590215 R3HDMLQ9H3Y0 253 aa22.23■■□□□ 1.15
MBD1-223ENST00000590215 RNF41Q9H4P4 317 aaPredicted RBP22.23■■□□□ 1.15
MBD1-223ENST00000590215 EMILIN3Q9NT22 766 aa22.23■■□□□ 1.15
MBD1-223ENST00000590215 U3KPZ7 1027 aaPredicted RBP22.23■■□□□ 1.15
MBD1-223ENST00000590215 PDHXO00330 501 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 TBC1D8O95759 1140 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 CRHR2Q13324 411 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 TAF1CQ15572 869 aaPredicted RBP22.22■■□□□ 1.15
MBD1-223ENST00000590215 TMOD4Q9NZQ9 345 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 NYAP2Q9P242 653 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 TSKSQ9UJT2 592 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 TMX2Q9Y320 296 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 LAMA4Q16363 1823 aa22.22■■□□□ 1.15
MBD1-223ENST00000590215 TSPY3P0CV98 308 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 TSPY8P0CW00 308 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 HOXA7P31268 230 aaPredicted RBP22.21■■□□□ 1.15
MBD1-223ENST00000590215 TFAP4Q01664 338 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 DGKZQ13574 1117 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 TREML2Q5T2D2 321 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 MFSD6Q6ZSS7 791 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 KIAA1211Q6ZU35 1233 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 CLEC10AQ8IUN9 316 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 ZFYVE28Q9HCC9 887 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 MTMR4Q9NYA4 1195 aa22.21■■□□□ 1.15
MBD1-223ENST00000590215 EEF2P13639 858 aaKnown RBP22.2■■□□□ 1.14
MBD1-223ENST00000590215 LBX1P52954 281 aa22.2■■□□□ 1.14
MBD1-223ENST00000590215 FAM47AQ5JRC9 791 aa22.2■■□□□ 1.14
MBD1-223ENST00000590215 FEZ1Q99689 392 aa22.2■■□□□ 1.14
MBD1-223ENST00000590215 SH2D4AQ9H788 454 aa22.2■■□□□ 1.14
MBD1-223ENST00000590215 PRDM10Q9NQV6 1147 aa22.2■■□□□ 1.14
MBD1-223ENST00000590215 ADGRA2Q96PE1 1338 aa22.2■■□□□ 1.14
MBD1-223ENST00000590215 TLR2O60603 784 aa22.19■■□□□ 1.14
MBD1-223ENST00000590215 CYP21A2P08686 494 aa22.19■■□□□ 1.14
MBD1-223ENST00000590215 NOVP48745 357 aa22.19■■□□□ 1.14
MBD1-223ENST00000590215 PABPC4Q13310 644 aaKnown RBP eCLIP22.19■■□□□ 1.14
MBD1-223ENST00000590215 MKL1Q969V6 931 aa22.19■■□□□ 1.14
MBD1-223ENST00000590215 CEP95Q96GE4 821 aa22.19■■□□□ 1.14
MBD1-223ENST00000590215 PARK7Q99497 189 aaKnown RBP22.19■■□□□ 1.14
MBD1-223ENST00000590215 TCP11L1Q9NUJ3 509 aa22.19■■□□□ 1.14
MBD1-223ENST00000590215 SYNPO2Q9UMS6 1093 aa22.19■■□□□ 1.14
MBD1-223ENST00000590215 RBM8AQ9Y5S9 174 aaKnown RBP22.19■■□□□ 1.14
MBD1-223ENST00000590215 NEDD4P46934 1319 aa22.18■■□□□ 1.14
MBD1-223ENST00000590215 TSPY2A6NKD2 308 aa22.18■■□□□ 1.14
MBD1-223ENST00000590215 GPR25O00155 361 aa22.18■■□□□ 1.14
MBD1-223ENST00000590215 RANBP6O60518 1105 aaKnown RBP22.18■■□□□ 1.14
MBD1-223ENST00000590215 PPP4R3BQ5MIZ7 849 aa22.18■■□□□ 1.14
MBD1-223ENST00000590215 LPAR1Q92633 364 aa22.18■■□□□ 1.14
MBD1-223ENST00000590215 VCPKMTQ9H867 229 aa22.18■■□□□ 1.14
MBD1-223ENST00000590215 IL17RBQ9NRM6 502 aa22.18■■□□□ 1.14
MBD1-223ENST00000590215 TTLL1O95922 423 aa22.17■■□□□ 1.14
MBD1-223ENST00000590215 VCAM1P19320 739 aa22.17■■□□□ 1.14
MBD1-223ENST00000590215 NKX2-3Q8TAU0 364 aa22.17■■□□□ 1.14
MBD1-223ENST00000590215 ANO2Q9NQ90 1003 aa22.17■■□□□ 1.14
MBD1-223ENST00000590215 PNMA3Q9UL41 463 aa22.17■■□□□ 1.14
MBD1-223ENST00000590215 CYP2C8P10632 490 aa22.16■■□□□ 1.14
MBD1-223ENST00000590215 NECTIN1Q15223 517 aa22.16■■□□□ 1.14
MBD1-223ENST00000590215 ZYXQ15942 572 aaKnown RBP22.16■■□□□ 1.14
MBD1-223ENST00000590215 RRP12Q5JTH9 1297 aaKnown RBP22.16■■□□□ 1.14
MBD1-223ENST00000590215 KIAA1755Q5JYT7 1200 aa22.16■■□□□ 1.14
MBD1-223ENST00000590215 C17orf99Q6UX52 265 aa22.16■■□□□ 1.14
MBD1-223ENST00000590215 ESR2Q92731 530 aa22.16■■□□□ 1.14
MBD1-223ENST00000590215 ASCC2Q9H1I8 757 aaPredicted RBP22.16■■□□□ 1.14
MBD1-223ENST00000590215 TOMM22Q9NS69 142 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms