RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 CEBPZQ03701 1054 aaKnown RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 GNL2Q13823 731 aaKnown RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 SAFBQ15424 915 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS25-202ENST00000589219 SBK1Q52WX2 424 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 ANO1Q5XXA6 986 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 ZNF804AQ7Z570 1209 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 ZNF654Q8IZM8 581 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 ENGASEQ8NFI3 743 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 TDRD7Q8NHU6 1098 aaKnown RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 NKX2-3Q8TAU0 364 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 WDR66Q8TBY9 1149 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 SDR42E1Q8WUS8 393 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 FTOQ9C0B1 505 aaKnown RBP eCLIP11.51□□□□□ -0.57
VPS25-202ENST00000589219 GOLPH3LQ9H4A5 285 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 FAM217BQ9NTX9 383 aaPredicted RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 RBM28Q9NW13 759 aaKnown RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 ABT1Q9ULW3 272 aaKnown RBP11.51□□□□□ -0.57
VPS25-202ENST00000589219 TNKSO95271 1327 aa11.51□□□□□ -0.57
VPS25-202ENST00000589219 MINDY4BA8MYZ0 360 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 GOLGA6L6A8MZA4 724 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 PPP6R2O75170 966 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 ADCY5O95622 1261 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 KLRK1P26718 216 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 GMPSP49915 693 aaPredicted RBP11.5□□□□□ -0.57
VPS25-202ENST00000589219 DYNLL1P63167 89 aaKnown RBP11.5□□□□□ -0.57
VPS25-202ENST00000589219 MECOMQ03112 1051 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 SEC23AQ15436 765 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 CAMK4Q16566 473 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 ANO6Q4KMQ2 910 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 IQCA1Q86XH1 822 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 DZIP1Q86YF9 867 aaKnown RBP11.5□□□□□ -0.57
VPS25-202ENST00000589219 CKAP2LQ8IYA6 745 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 EYA3Q99504 573 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 SLC26A6Q9BXS9 759 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 RNF26Q9BY78 433 aaPredicted RBP11.5□□□□□ -0.57
VPS25-202ENST00000589219 PCDHA7Q9UN72 937 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS25-202ENST00000589219 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
VPS25-202ENST00000589219 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 PPFIA3O75145 1194 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 RAD17O75943 681 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 RXRAP19793 462 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 ATP2B4P23634 1241 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 U2AF2P26368 475 aaKnown RBP eCLIP11.49□□□□□ -0.574e-8■□□□□ 9.6
VPS25-202ENST00000589219 CTCFP49711 727 aaPredicted RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 SNW1Q13573 536 aaKnown RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 SLC39A14Q15043 492 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 CATIPQ7Z7H3 387 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 CCDC144CPQ8IYA2 1237 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 FMR1NBQ8N0W7 255 aaPredicted RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 ZNF384Q8TF68 577 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 PHKBQ93100 1093 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 ZSCAN10Q96SZ4 725 aaPredicted RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 MYL10Q9BUA6 226 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 CBX8Q9HC52 389 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 ANO10Q9NW15 660 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 CLIC4Q9Y696 253 aa11.49□□□□□ -0.57
VPS25-202ENST00000589219 MORC2Q9Y6X9 1032 aaPredicted RBP11.49□□□□□ -0.57
VPS25-202ENST00000589219 H7C1D1 291 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 MMP1P03956 469 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 POLR3DP05423 398 aaPredicted RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 XBP1P17861 261 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 CMA1P23946 247 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 ECE1P42892 770 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 MAP2K1Q02750 393 aaPredicted RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 IFIT1BQ5T764 474 aaKnown RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 CTR9Q6PD62 1173 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 FANCBQ8NB91 859 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 NOL10Q9BSC4 688 aaKnown RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS25-202ENST00000589219 FOXP1Q9H334 677 aaPredicted RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 DCP1AQ9NPI6 582 aaPredicted RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 PRDM10Q9NQV6 1147 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 ANKIB1Q9P2G1 1089 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 CNOT7Q9UIV1 285 aaKnown RBP11.48□□□□□ -0.57
VPS25-202ENST00000589219 NAV1Q8NEY1 1877 aa11.48□□□□□ -0.57
VPS25-202ENST00000589219 FAM237AA0A1B0GTK4 181 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 FOXN1O15353 648 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 LDHBP07195 334 aaKnown RBP11.47□□□□□ -0.57
VPS25-202ENST00000589219 LDHCP07864 332 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 PRDX5P30044 214 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 ZNF165P49910 485 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 AKAP17AQ02040 695 aaKnown RBP11.47□□□□□ -0.57
VPS25-202ENST00000589219 PDE4BQ07343 736 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 CCDC178Q5BJE1 867 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 NBPF11Q86T75 865 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 NOSTRINQ8IVI9 506 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 CEP57L1Q8IYX8 460 aa11.47□□□□□ -0.57
VPS25-202ENST00000589219 CRACR2BQ8N4Y2 399 aaPredicted RBP11.47□□□□□ -0.57
VPS25-202ENST00000589219 ENAHQ8N8S7 591 aaPredicted RBP11.47□□□□□ -0.57
VPS25-202ENST00000589219 DPF2Q92785 391 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms