RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 SAP30BPQ9UHR5 308 aaKnown RBP10.2□□□□□ -0.78
SMAD4-206ENST00000588860 GAKO14976 1311 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 SYCE3A1L190 88 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 F8W031 263 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 FMNL1O95466 1100 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 POLR3DP05423 398 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 CHRM1P11229 460 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 RCAN1P53805 252 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 FAM47AQ5JRC9 791 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 CCDC183Q5T5S1 534 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 IFIT1BQ5T764 474 aaKnown RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 C12orf60Q5U649 245 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 CATIPQ7Z7H3 387 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 PDCD7Q8N8D1 485 aaKnown RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 LEO1Q8WVC0 666 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 L3MBTL3Q96JM7 780 aaPredicted RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 AIFM3Q96NN9 605 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
SMAD4-206ENST00000588860 CFAP45Q9UL16 551 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 TAOK2Q9UL54 1235 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 SUGT1Q9Y2Z0 365 aa10.19□□□□□ -0.78
SMAD4-206ENST00000588860 PCNTO95613 3336 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 FLT1P17948 1338 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 CCDC196A0A1B0GTZ2 297 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 GOLGA6L4A6NEF3 574 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 TSPY2A6NKD2 308 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 IFNAR1P17181 557 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 TRIM29Q14134 588 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 NTRK3Q16288 839 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 TRIM22Q8IYM9 498 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 CERS5Q8N5B7 392 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 FANCBQ8NB91 859 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 FBXO18Q8NFZ0 1043 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 WASF1Q92558 559 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 DYNLL2Q96FJ2 89 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 MXD3Q9BW11 206 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 DBNDD1Q9H9R9 158 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 MKNK2Q9HBH9 465 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 TTF2Q9UNY4 1162 aaKnown RBP10.18□□□□□ -0.78
SMAD4-206ENST00000588860 DAGLAQ9Y4D2 1042 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 BRCA1P38398 1863 aaKnown RBP10.18□□□□□ -0.78
SMAD4-206ENST00000588860 SIPA1L1O43166 1804 aa10.18□□□□□ -0.78
SMAD4-206ENST00000588860 NMT2O60551 498 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 DDAH1O94760 285 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 CALM1P0DP23 149 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 CALM2P0DP24 149 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 CALM3P0DP25 149 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 XRCC6P12956 609 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMAD4-206ENST00000588860 RHBDL3P58872 404 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 KIF23Q02241 960 aaPredicted RBP10.17□□□□□ -0.78
SMAD4-206ENST00000588860 CEBPZQ03701 1054 aaKnown RBP10.17□□□□□ -0.78
SMAD4-206ENST00000588860 GNL2Q13823 731 aaKnown RBP10.17□□□□□ -0.78
SMAD4-206ENST00000588860 KRT40Q6A162 431 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 ATL3Q6DD88 541 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 LRSAM1Q6UWE0 723 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 BRAPQ7Z569 592 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 GJB4Q9NTQ9 266 aa10.17□□□□□ -0.78
SMAD4-206ENST00000588860 SNED1Q8TER0 1413 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 GREB1LQ9C091 1923 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-206ENST00000588860 KIF28PB7ZC32 967 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 ECE2O60344 883 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 HSPA1AP0DMV8 641 aaKnown RBP10.16□□□□□ -0.78
SMAD4-206ENST00000588860 HSPA1BP0DMV9 641 aaKnown RBP10.16□□□□□ -0.78
SMAD4-206ENST00000588860 NT5C2P49902 561 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 SCNN1DP51172 638 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 TFAP4Q01664 338 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 NBPF11Q86T75 865 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 CMTR1Q8N1G2 835 aaKnown RBP10.16□□□□□ -0.78
SMAD4-206ENST00000588860 CRACR2BQ8N4Y2 399 aaPredicted RBP10.16□□□□□ -0.78
SMAD4-206ENST00000588860 BICD2Q8TD16 824 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 USP28Q96RU2 1077 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 FTOQ9C0B1 505 aaKnown RBP eCLIP10.16□□□□□ -0.78
SMAD4-206ENST00000588860 TSPY26PQ9H489 355 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 RBM28Q9NW13 759 aaKnown RBP10.16□□□□□ -0.78
SMAD4-206ENST00000588860 ARFGEF1Q9Y6D6 1849 aa10.16□□□□□ -0.78
SMAD4-206ENST00000588860 UBE2Q2LH0YL09 131 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 LETM1O95202 739 aaPredicted RBP10.15□□□□□ -0.78
SMAD4-206ENST00000588860 DEXIO95424 95 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 TSPY3P0CV98 308 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 TSPY8P0CW00 308 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 LIG1P18858 919 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 PLCD1P51178 756 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 AKAP17AQ02040 695 aaKnown RBP10.15□□□□□ -0.78
SMAD4-206ENST00000588860 MKRN3Q13064 507 aaKnown RBP10.15□□□□□ -0.78
SMAD4-206ENST00000588860 PICALMQ13492 652 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 PPP2R5BQ15173 497 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 AOC3Q16853 763 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 CCDC178Q5BJE1 867 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 C16orf86Q6ZW13 317 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 PODNQ7Z5L7 613 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.78
SMAD4-206ENST00000588860 ZNF444Q8N0Y2 327 aaPredicted RBP10.15□□□□□ -0.78
SMAD4-206ENST00000588860 CCDC82Q8N4S0 544 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 SLC44A5Q8NCS7 719 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 SUPT20HQ8NEM7 779 aa10.15□□□□□ -0.78
SMAD4-206ENST00000588860 CTCFLQ8NI51 663 aaPredicted RBP10.15□□□□□ -0.78
SMAD4-206ENST00000588860 RBM46Q8TBY0 533 aaKnown RBP10.15□□□□□ -0.78
SMAD4-206ENST00000588860 C7orf43Q8WVR3 580 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms