RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 IFFO2Q5TF58 517 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 METTL16Q86W50 562 aaKnown RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 TRIM22Q8IYM9 498 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 CTCFLQ8NI51 663 aaPredicted RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 NUP133Q8WUM0 1156 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 SENP2Q9HC62 589 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 ORC3Q9UBD5 711 aaPredicted RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 HERC5Q9UII4 1024 aaKnown RBP12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 ZDHHC9Q9Y397 364 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 PCDHAC2Q9Y5I4 1007 aa12.24□□□□□ -0.45
CHMP1B-202ENST00000588284 MYH1P12882 1939 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 NAV1Q8NEY1 1877 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 ATRNL1Q5VV63 1379 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 JAK2O60674 1132 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 IFNAR1P17181 557 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 MCM4P33991 863 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 CACNB3P54284 484 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 TNFAIP1Q13829 316 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 ZFPM1Q8IX07 1006 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 GPC2Q8N158 579 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 SLC44A5Q8NCS7 719 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 SP7Q8TDD2 431 aaPredicted RBP12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 DDX11Q96FC9 970 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 IL17RBQ9NRM6 502 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 ZNF646O15015 1829 aaPredicted RBP12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 LAMB1P07942 1786 aa12.23□□□□□ -0.45
CHMP1B-202ENST00000588284 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 DDX11L8A8MPP1 907 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 TCP10L2B9ZVM9 353 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 WNT10BO00744 389 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 TBC1D12O60347 775 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 GRIN3BO60391 1043 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 BAG4O95429 457 aaKnown RBP12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 TOP1P11387 765 aaKnown RBP12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 NOVP48745 357 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 PRELPP51888 382 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 AKAP17AQ02040 695 aaKnown RBP12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 TROAPQ12815 778 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 CERKLQ49MI3 558 aaPredicted RBP12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 RCSD1Q6JBY9 416 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 TATDN1Q6P1N9 297 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 MICALL2Q8IY33 904 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 LZTS2Q9BRK4 669 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 ZSCAN16Q9H4T2 348 aaPredicted RBP12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 MTMR6Q9Y217 621 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 FOCADQ5VW36 1801 aa12.22□□□□□ -0.45
CHMP1B-202ENST00000588284 CDK5RAP2Q96SN8 1893 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 STK36Q9NRP7 1315 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 CLRN2A0PK11 232 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 VPS37CA5D8V6 355 aaPredicted RBP12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 NMT2O60551 498 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 F13A1P00488 732 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 CDC27P30260 824 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 SHMT1P34896 483 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 PKP1Q13835 747 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 NTRK3Q16288 839 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 RBM26Q5T8P6 1007 aaKnown RBP12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 SH3BP5LQ7L8J4 393 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 RAB11FIP4Q86YS3 637 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 CSRNP1Q96S65 589 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 TMEM47Q9BQJ4 181 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 MYL10Q9BUA6 226 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 VEZTQ9HBM0 779 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 CABP5Q9NP86 173 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 MTMR4Q9NYA4 1195 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 RBM27Q9P2N5 1060 aaKnown RBP12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 STX8Q9UNK0 236 aa12.21□□□□□ -0.45
CHMP1B-202ENST00000588284 PLIN4Q96Q06 1357 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 PRPF3O43395 683 aaKnown RBP12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 FDPSP14324 419 aaKnown RBP12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 RXRAP19793 462 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 TRIM29Q14134 588 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 GPR162Q16538 588 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 NBPF9Q3BBW0 867 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 DPY19L2Q6NUT2 758 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 CCDC144CPQ8IYA2 1237 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 HOOK2Q96ED9 719 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 C8orf76Q96K31 380 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 RNF26Q9BY78 433 aaPredicted RBP12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 ECM29Q5VYK3 1845 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 CEP350Q5VT06 3117 aa12.2□□□□□ -0.46
CHMP1B-202ENST00000588284 ZNF541Q9H0D2 1346 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 IGKV6D-41A0A0C4DH26 115 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 MPHOSPH10O00566 681 aaKnown RBP12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 DEXIO95424 95 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 TTLL1O95922 423 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 AKR1B1P15121 316 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 XBP1P17861 261 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 SMARCA1P28370 1054 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 LMOD1P29536 600 aaPredicted RBP12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 CSPP1Q1MSJ5 1256 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
CHMP1B-202ENST00000588284 KIF4BQ2VIQ3 1234 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms