RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 PLEKHH3Q7Z736 793 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 ACER1Q8TDN7 264 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 GTF3C2Q8WUA4 911 aaPredicted RBP17.2■□□□□ 0.34
ERCC1-205ENST00000587888 SOCS4Q8WXH5 440 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 EHD4Q9H223 541 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 C11orf49Q9H6J7 331 aa17.2■□□□□ 0.34
ERCC1-205ENST00000587888 RGS2P41220 211 aa17.19■□□□□ 0.34
ERCC1-205ENST00000587888 CACNB2Q08289 660 aaPredicted RBP17.19■□□□□ 0.34
ERCC1-205ENST00000587888 HSP90AB4PQ58FF6 505 aa17.19■□□□□ 0.34
ERCC1-205ENST00000587888 MORN1Q5T089 497 aa17.19■□□□□ 0.34
ERCC1-205ENST00000587888 SLC9C2Q5TAH2 1124 aa17.19■□□□□ 0.34
ERCC1-205ENST00000587888 CATSPERGQ6ZRH7 1159 aa17.19■□□□□ 0.34
ERCC1-205ENST00000587888 TRMT44Q8IYL2 757 aaKnown RBP17.19■□□□□ 0.34
ERCC1-205ENST00000587888 USP6NLQ92738 828 aa17.19■□□□□ 0.34
ERCC1-205ENST00000587888 OGDHLQ9ULD0 1010 aa17.19■□□□□ 0.34
ERCC1-205ENST00000587888 ZMYND8Q9ULU4 1186 aaPredicted RBP17.19■□□□□ 0.34
ERCC1-205ENST00000587888 CNMDO75829 334 aa17.18■□□□□ 0.34
ERCC1-205ENST00000587888 SYN1P17600 705 aa17.18■□□□□ 0.34
ERCC1-205ENST00000587888 SHMT1P34896 483 aa17.18■□□□□ 0.34
ERCC1-205ENST00000587888 MNX1P50219 401 aaPredicted RBP17.18■□□□□ 0.34
ERCC1-205ENST00000587888 USP14P54578 494 aa17.18■□□□□ 0.34
ERCC1-205ENST00000587888 TTF1Q15361 905 aaPredicted RBP17.18■□□□□ 0.34
ERCC1-205ENST00000587888 MAP3K21Q5TCX8 1036 aa17.18■□□□□ 0.34
ERCC1-205ENST00000587888 CLASRPQ8N2M8 674 aaKnown RBP17.18■□□□□ 0.34
ERCC1-205ENST00000587888 C12orf42Q96LP6 360 aa17.18■□□□□ 0.34
ERCC1-205ENST00000587888 RIOK1Q9BRS2 568 aaKnown RBP17.18■□□□□ 0.34
ERCC1-205ENST00000587888 RABGAP1Q9Y3P9 1069 aa17.18■□□□□ 0.34
ERCC1-205ENST00000587888 GOLIM4O00461 696 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 MPHOSPH10O00566 681 aaKnown RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 IFIT2P09913 472 aaKnown RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 PDE6AP16499 860 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 VCAM1P19320 739 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 CCND3P30281 292 aaPredicted RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 EVX2Q03828 476 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 SEPT2Q15019 361 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 DIEXFQ68CQ4 756 aaKnown RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 EDC3Q96F86 508 aaKnown RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 DNAJC2Q99543 621 aaKnown RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 CRNKL1Q9BZJ0 848 aaKnown RBP17.17■□□□□ 0.34
ERCC1-205ENST00000587888 KIAA1683Q9H0B3 1180 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 MCM9Q9NXL9 1143 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 ZNF532Q9HCE3 1301 aa17.17■□□□□ 0.34
ERCC1-205ENST00000587888 GUCY1A2P33402 732 aa17.16■□□□□ 0.34
ERCC1-205ENST00000587888 CCNA1P78396 465 aa17.16■□□□□ 0.34
ERCC1-205ENST00000587888 MAP2K5Q13163 448 aa17.16■□□□□ 0.34
ERCC1-205ENST00000587888 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
ERCC1-205ENST00000587888 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
ERCC1-205ENST00000587888 CEP290O15078 2479 aa17.16■□□□□ 0.34
ERCC1-205ENST00000587888 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 SOX1O00570 391 aaPredicted RBP17.15■□□□□ 0.34
ERCC1-205ENST00000587888 GLRX3O76003 335 aaKnown RBP17.15■□□□□ 0.34
ERCC1-205ENST00000587888 MS4A1P11836 297 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 LHX8Q68G74 356 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
ERCC1-205ENST00000587888 SDR42E1Q8WUS8 393 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 APBA2Q99767 749 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 TRIOBPQ9H2D6 2365 aa17.15■□□□□ 0.34
ERCC1-205ENST00000587888 DDX60LQ5H9U9 1706 aaKnown RBP17.14■□□□□ 0.33
ERCC1-205ENST00000587888 A0A1W2PPC1 479 aa17.14■□□□□ 0.33
ERCC1-205ENST00000587888 CYP2D6P10635 497 aa17.14■□□□□ 0.33
ERCC1-205ENST00000587888 LCORLQ8N3X6 602 aa17.14■□□□□ 0.33
ERCC1-205ENST00000587888 LRCH3Q96II8 777 aa17.14■□□□□ 0.33
ERCC1-205ENST00000587888 GDF15Q99988 308 aa17.14■□□□□ 0.33
ERCC1-205ENST00000587888 FLRT1Q9NZU1 646 aa17.14■□□□□ 0.33
ERCC1-205ENST00000587888 A0A1W2PRG0 241 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 SLC15A5A6NIM6 579 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 HMMRO75330 724 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 PTPREP23469 700 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 CNGA1P29973 690 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 ATP2B2Q01814 1243 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 GABPAQ06546 454 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 SLFNL1Q499Z3 407 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 MFSD14CQ5VZR4 134 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 SIRT2Q8IXJ6 389 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 BOLA2Q9H3K6 86 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 ARMT1Q9H993 441 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 IVNS1ABPQ9Y6Y0 642 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 PFASO15067 1338 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
ERCC1-205ENST00000587888 TCRBV5S4A2TA0A5A2 114 aa17.12■□□□□ 0.33
ERCC1-205ENST00000587888 SPDYE16A6NNV3 312 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-205ENST00000587888 PRKAB2O43741 272 aa17.12■□□□□ 0.33
ERCC1-205ENST00000587888 BMP8BP34820 402 aa17.12■□□□□ 0.33
ERCC1-205ENST00000587888 COG2Q14746 738 aa17.12■□□□□ 0.33
ERCC1-205ENST00000587888 SLC44A5Q8NCS7 719 aa17.12■□□□□ 0.33
ERCC1-205ENST00000587888 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.12■□□□□ 0.33
ERCC1-205ENST00000587888 DYNLL2Q96FJ2 89 aa17.12■□□□□ 0.33
ERCC1-205ENST00000587888 DCP1AQ9NPI6 582 aaPredicted RBP17.12■□□□□ 0.33
ERCC1-205ENST00000587888 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
ERCC1-205ENST00000587888 MAGEA10P43363 369 aaPredicted RBP17.11■□□□□ 0.33
ERCC1-205ENST00000587888 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
ERCC1-205ENST00000587888 NPLOC4Q8TAT6 608 aa17.11■□□□□ 0.33
ERCC1-205ENST00000587888 TANGO6Q9C0B7 1094 aa17.11■□□□□ 0.33
ERCC1-205ENST00000587888 ZBTB40Q9NUA8 1239 aa17.11■□□□□ 0.33
ERCC1-205ENST00000587888 PAG1Q9NWQ8 432 aa17.11■□□□□ 0.33
ERCC1-205ENST00000587888 HOXC10Q9NYD6 342 aa17.11■□□□□ 0.33
ERCC1-205ENST00000587888 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms