RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PAK6Q9NQU5 681 aaPredicted RBP22.73■■□□□ 1.23
TRIM47-205ENST00000587774 MCM9Q9NXL9 1143 aa22.73■■□□□ 1.23
TRIM47-205ENST00000587774 GJD2Q9UKL4 321 aa22.73■■□□□ 1.23
TRIM47-205ENST00000587774 ADD2P35612 726 aa22.72■■□□□ 1.23
TRIM47-205ENST00000587774 GPRC5AQ8NFJ5 357 aa22.72■■□□□ 1.23
TRIM47-205ENST00000587774 DEFB118Q96PH6 123 aa22.72■■□□□ 1.23
TRIM47-205ENST00000587774 HAUS7Q99871 368 aa22.72■■□□□ 1.23
TRIM47-205ENST00000587774 LRRCC1Q9C099 1032 aa22.72■■□□□ 1.23
TRIM47-205ENST00000587774 ARMT1Q9H993 441 aa22.72■■□□□ 1.23
TRIM47-205ENST00000587774 DCP1AQ9NPI6 582 aaPredicted RBP22.72■■□□□ 1.23
TRIM47-205ENST00000587774 FARP2O94887 1054 aaPredicted RBP22.71■■□□□ 1.23
TRIM47-205ENST00000587774 HMGCRP04035 888 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 ERVK-9P63128 1117 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 ERVK-24P63145 666 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 HABP4Q5JVS0 413 aaKnown RBP22.71■■□□□ 1.23
TRIM47-205ENST00000587774 POTEEQ6S8J3 1075 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 ACER1Q8TDN7 264 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 PAGR1Q9BTK6 254 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 KIAA1683Q9H0B3 1180 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 RBPJLQ9UBG7 517 aa22.71■■□□□ 1.23
TRIM47-205ENST00000587774 H0YGN5 161 aa22.7■■□□□ 1.22
TRIM47-205ENST00000587774 SMARCA5O60264 1052 aaPredicted RBP22.7■■□□□ 1.22
TRIM47-205ENST00000587774 MBD4O95243 580 aa22.7■■□□□ 1.22
TRIM47-205ENST00000587774 CHGBP05060 677 aa22.7■■□□□ 1.22
TRIM47-205ENST00000587774 CYP2D6P10635 497 aa22.7■■□□□ 1.22
TRIM47-205ENST00000587774 VCAM1P19320 739 aa22.7■■□□□ 1.22
TRIM47-205ENST00000587774 GUCY1A2P33402 732 aa22.7■■□□□ 1.22
TRIM47-205ENST00000587774 GTF3C2Q8WUA4 911 aaPredicted RBP22.7■■□□□ 1.22
TRIM47-205ENST00000587774 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.7■■□□□ 1.222e-7■■■■□ 20.1
TRIM47-205ENST00000587774 CABP5Q9NP86 173 aa22.7■■□□□ 1.22
TRIM47-205ENST00000587774 USP14P54578 494 aa22.69■■□□□ 1.22
TRIM47-205ENST00000587774 TRIM32Q13049 653 aa22.69■■□□□ 1.22
TRIM47-205ENST00000587774 Q3C1V9 767 aa22.69■■□□□ 1.22
TRIM47-205ENST00000587774 SLC44A5Q8NCS7 719 aa22.69■■□□□ 1.22
TRIM47-205ENST00000587774 TRIB2Q92519 343 aa22.69■■□□□ 1.22
TRIM47-205ENST00000587774 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.69■■□□□ 1.22
TRIM47-205ENST00000587774 PORCNQ9H237 461 aa22.69■■□□□ 1.22
TRIM47-205ENST00000587774 SEPT2Q15019 361 aa22.68■■□□□ 1.22
TRIM47-205ENST00000587774 SOCS4Q8WXH5 440 aa22.68■■□□□ 1.22
TRIM47-205ENST00000587774 DPF3Q92784 378 aa22.68■■□□□ 1.22
TRIM47-205ENST00000587774 CRISPLD2Q9H0B8 497 aa22.68■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L15C9J2P7 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L13C9JLJ4 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L11C9JVI0 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L18D6R9N7 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L22D6RA61 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L17D6RBQ6 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L19D6RCP7 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L20D6RJB6 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 PRKAB2O43741 272 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 CYP2B6P20813 491 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 MAPK4P31152 587 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 USP17L24Q0WX57 530 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 HTATIP2Q9BUP3 242 aa22.67■■□□□ 1.22
TRIM47-205ENST00000587774 COLQQ9Y215 455 aaPredicted RBP22.67■■□□□ 1.22
TRIM47-205ENST00000587774 LAMA3Q16787 3333 aa22.66■■□□□ 1.22
TRIM47-205ENST00000587774 MPHOSPH10O00566 681 aaKnown RBP22.66■■□□□ 1.22
TRIM47-205ENST00000587774 CNMDO75829 334 aa22.66■■□□□ 1.22
TRIM47-205ENST00000587774 TFRCP02786 760 aaKnown RBP22.66■■□□□ 1.22
TRIM47-205ENST00000587774 CATSPERGQ6ZRH7 1159 aa22.66■■□□□ 1.22
TRIM47-205ENST00000587774 GPR142Q7Z601 462 aa22.66■■□□□ 1.22
TRIM47-205ENST00000587774 NUDT12Q9BQG2 462 aa22.66■■□□□ 1.22
TRIM47-205ENST00000587774 RPTORQ8N122 1335 aa22.65■■□□□ 1.22
TRIM47-205ENST00000587774 CCAR1Q8IX12 1150 aaKnown RBP22.65■■□□□ 1.22
TRIM47-205ENST00000587774 DYNLL2Q96FJ2 89 aa22.65■■□□□ 1.22
TRIM47-205ENST00000587774 RPAP3Q9H6T3 665 aaPredicted RBP22.65■■□□□ 1.22
TRIM47-205ENST00000587774 ATP8A2Q9NTI2 1148 aa22.65■■□□□ 1.22
TRIM47-205ENST00000587774 RABGAP1Q9Y3P9 1069 aa22.65■■□□□ 1.22
TRIM47-205ENST00000587774 A0A1W2PRG0 241 aa22.64■■□□□ 1.21
TRIM47-205ENST00000587774 SMIM22K7EJ46 135 aa22.64■■□□□ 1.21
TRIM47-205ENST00000587774 XRCC5P13010 732 aaKnown RBP22.64■■□□□ 1.21
TRIM47-205ENST00000587774 UBE3CQ15386 1083 aa22.64■■□□□ 1.21
TRIM47-205ENST00000587774 USP6NLQ92738 828 aa22.64■■□□□ 1.21
TRIM47-205ENST00000587774 HMX1Q9NP08 348 aaPredicted RBP22.64■■□□□ 1.21
TRIM47-205ENST00000587774 SWAP70Q9UH65 585 aa22.64■■□□□ 1.21
TRIM47-205ENST00000587774 CYP2D7A0A087X1C5 515 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 SPDYE16A6NNV3 312 aaPredicted RBP22.63■■□□□ 1.21
TRIM47-205ENST00000587774 CAPN2P17655 700 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 MORN1Q5T089 497 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 MAP3K21Q5TCX8 1036 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 LBX2Q6XYB7 198 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 TMEM179Q6ZVK1 233 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 PLEKHH3Q7Z736 793 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 CLEC10AQ8IUN9 316 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 ECHDC1Q9NTX5 307 aa22.63■■□□□ 1.21
TRIM47-205ENST00000587774 PRKAR2AP13861 404 aaKnown RBP22.62■■□□□ 1.21
TRIM47-205ENST00000587774 ZKSCAN1P17029 563 aaPredicted RBP22.62■■□□□ 1.21
TRIM47-205ENST00000587774 DIS3LQ8TF46 1054 aaKnown RBP22.62■■□□□ 1.21
TRIM47-205ENST00000587774 PAWRQ96IZ0 340 aaKnown RBP22.62■■□□□ 1.21
TRIM47-205ENST00000587774 PUS7LQ9H0K6 701 aaKnown RBP22.62■■□□□ 1.21
TRIM47-205ENST00000587774 DCTPP1Q9H773 170 aa22.62■■□□□ 1.21
TRIM47-205ENST00000587774 BTBD7Q9P203 1132 aa22.62■■□□□ 1.21
TRIM47-205ENST00000587774 SMCHD1A6NHR9 2005 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 AKR1B1P15121 316 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 RGS2P41220 211 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 CCNA1P78396 465 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 CCL14Q16627 93 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 C12orf60Q5U649 245 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 TSHZ3Q63HK5 1081 aa22.61■■□□□ 1.21
TRIM47-205ENST00000587774 ZSCAN25Q6NSZ9 544 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms