RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 PLCH1Q4KWH8 1693 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 BCORQ6W2J9 1755 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 TRAPPC10P48553 1259 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 TRIM14Q14142 442 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 SEC23AQ15436 765 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 KIFC2Q96AC6 838 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 PHF20Q9BVI0 1012 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 ARFGAP3Q9NP61 516 aa21.13■□□□□ 0.97
DDX39A-206ENST00000587730 DISP2A7MBM2 1401 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 KIF5CO60282 957 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 DDAH1O94760 285 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 TUBBP07437 444 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 NR5A1Q13285 461 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 SPECC1Q5M775 1068 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 CDKAL1Q5VV42 579 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 CEP112Q8N8E3 955 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 ANKRD20A12PQ8NF67 263 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 NUP133Q8WUM0 1156 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 CALCOCO1Q9P1Z2 691 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 NUP98P52948 1817 aa21.12■□□□□ 0.97
DDX39A-206ENST00000587730 BRD3Q15059 726 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 TOGARAM2Q6ZUX3 1019 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 SYTL4Q96C24 671 aaPredicted RBP21.11■□□□□ 0.97
DDX39A-206ENST00000587730 INCENPQ9NQS7 918 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 TACC3Q9Y6A5 838 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 TNKSO95271 1327 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 FECHP22830 423 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 ADKP55263 362 aaKnown RBP21.11■□□□□ 0.97
DDX39A-206ENST00000587730 SEMA3FQ13275 785 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 CUL4BQ13620 913 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 IQCA1Q86XH1 822 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 HELBQ8NG08 1087 aaPredicted RBP21.11■□□□□ 0.97
DDX39A-206ENST00000587730 PAGE5Q96GU1 130 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 C8orf37Q96NL8 207 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 BRIP1Q9BX63 1249 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 MYO1AQ9UBC5 1043 aa21.11■□□□□ 0.97
DDX39A-206ENST00000587730 ADD3Q9UEY8 706 aaKnown RBP21.11■□□□□ 0.97
DDX39A-206ENST00000587730 TTF2Q9UNY4 1162 aaKnown RBP21.11■□□□□ 0.97
DDX39A-206ENST00000587730 ITGB4P16144 1822 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.1■□□□□ 0.97
DDX39A-206ENST00000587730 MAGEB6P1A0A0J9YX57 407 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 CCDC151A5D8V7 595 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 PBX1P40424 430 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 PLA2G4AP47712 749 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 GRIN1Q05586 938 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 CC2D1AQ6P1N0 951 aaPredicted RBP21.1■□□□□ 0.97
DDX39A-206ENST00000587730 IGSF22Q8N9C0 903 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 DHX58Q96C10 678 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 WDR24Q96S15 920 aa21.1■□□□□ 0.97
DDX39A-206ENST00000587730 ZSCAN10Q96SZ4 725 aaPredicted RBP21.1■□□□□ 0.97
DDX39A-206ENST00000587730 SAMSN1Q9NSI8 373 aaKnown RBP21.1■□□□□ 0.97
DDX39A-206ENST00000587730 MYO5AQ9Y4I1 1855 aaKnown RBP21.09■□□□□ 0.97
DDX39A-206ENST00000587730 UBE2Q2LH0YL09 131 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 PRKAB2O43741 272 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 IGSF3O75054 1194 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 CYP7A1P22680 504 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 CYP2C19P33261 490 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 TXLNAP40222 546 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 DPYDQ12882 1025 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 GPS2Q13227 327 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 TRMT44Q8IYL2 757 aaKnown RBP21.09■□□□□ 0.97
DDX39A-206ENST00000587730 MSL3Q8N5Y2 521 aaKnown RBP21.09■□□□□ 0.97
DDX39A-206ENST00000587730 IQUBQ8NA54 791 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 ZKSCAN3Q9BRR0 538 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 UBXN6Q9BZV1 441 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 RMND1Q9NWS8 449 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 TAOK2Q9UL54 1235 aa21.09■□□□□ 0.97
DDX39A-206ENST00000587730 FANCGO15287 622 aa21.08■□□□□ 0.97
DDX39A-206ENST00000587730 EIF5P55010 431 aaKnown RBP21.08■□□□□ 0.97
DDX39A-206ENST00000587730 APTXQ7Z2E3 356 aaKnown RBP21.08■□□□□ 0.97
DDX39A-206ENST00000587730 TMTC1Q8IUR5 882 aa21.08■□□□□ 0.97
DDX39A-206ENST00000587730 CCDC12Q8WUD4 166 aaPredicted RBP21.08■□□□□ 0.97
DDX39A-206ENST00000587730 SLC4A9Q96Q91 983 aa21.08■□□□□ 0.97
DDX39A-206ENST00000587730 BTG4Q9NY30 223 aa21.08■□□□□ 0.97
DDX39A-206ENST00000587730 ADGRG1Q9Y653 693 aa21.08■□□□□ 0.97
DDX39A-206ENST00000587730 ZNF804BA4D1E1 1349 aa21.08■□□□□ 0.97
DDX39A-206ENST00000587730 MFAP3LO75121 409 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 FGRP09769 529 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 GOLGA8FQ08AF8 430 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 GOLGA8DPQ0D2H9 430 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 ZNF827Q17R98 1081 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 IFIT1BQ5T764 474 aaKnown RBP21.08■□□□□ 0.96
DDX39A-206ENST00000587730 MEX3CQ5U5Q3 659 aaKnown RBP21.08■□□□□ 0.96
DDX39A-206ENST00000587730 RASGRP2Q7LDG7 609 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 SRGAP1Q7Z6B7 1085 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 OXER1Q8TDS5 423 aa21.08■□□□□ 0.96
DDX39A-206ENST00000587730 FUT2Q10981 343 aa21.07■□□□□ 0.96
DDX39A-206ENST00000587730 FAM177A1Q8N128 213 aaPredicted RBP21.07■□□□□ 0.96
DDX39A-206ENST00000587730 HNRNPLLQ8WVV9 542 aaKnown RBP21.07■□□□□ 0.96
DDX39A-206ENST00000587730 SYMPKQ92797 1274 aaKnown RBP21.07■□□□□ 0.96
DDX39A-206ENST00000587730 MED15Q96RN5 788 aa21.07■□□□□ 0.96
DDX39A-206ENST00000587730 BCL9LQ86UU0 1499 aa21.07■□□□□ 0.96
DDX39A-206ENST00000587730 LRRC10BA6NIK2 292 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 BCAMP50895 628 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 ATP2C1P98194 919 aaPredicted RBP21.06■□□□□ 0.96
DDX39A-206ENST00000587730 PKN1Q16512 942 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 SUSD4Q5VX71 490 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 LIMA1Q9UHB6 759 aaKnown RBP21.06■□□□□ 0.96
DDX39A-206ENST00000587730 CDC23Q9UJX2 597 aa21.06■□□□□ 0.96
DDX39A-206ENST00000587730 ERLIN1O75477 346 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms