RNA–Protein interactions for RNA: ENST00000586607.5

H3F3B-204, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 4 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-204ENST00000586607 TAF1CQ15572 869 aaPredicted RBP11.66□□□□□ -0.54
H3F3B-204ENST00000586607 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
H3F3B-204ENST00000586607 USP17L2Q6R6M4 530 aa11.66□□□□□ -0.54
H3F3B-204ENST00000586607 CWC27Q6UX04 472 aaKnown RBP11.66□□□□□ -0.54
H3F3B-204ENST00000586607 CCDC84Q86UT8 332 aaPredicted RBP11.66□□□□□ -0.54
H3F3B-204ENST00000586607 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
H3F3B-204ENST00000586607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
H3F3B-204ENST00000586607 PLIN4Q96Q06 1357 aa11.66□□□□□ -0.54
H3F3B-204ENST00000586607 IGKV6D-41A0A0C4DH26 115 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 HMGCS2P54868 508 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 MTMR2Q13614 643 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 SEPT2Q15019 361 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 RAB3GAP1Q15042 981 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 C17orf99Q6UX52 265 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 PARK7Q99497 189 aaKnown RBP11.65□□□□□ -0.54
H3F3B-204ENST00000586607 R3HDMLQ9H3Y0 253 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 SH2D4AQ9H788 454 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 KANSL2Q9H9L4 492 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 MKNK2Q9HBH9 465 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 TMOD4Q9NZQ9 345 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 TMX2Q9Y320 296 aa11.65□□□□□ -0.54
H3F3B-204ENST00000586607 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-204ENST00000586607 SGSM2O43147 1006 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 ORC4O43929 436 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 FKTNO75072 461 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 GADL1Q6ZQY3 521 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 SIAH1Q8IUQ4 282 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 ZNF444Q8N0Y2 327 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-204ENST00000586607 ZNF296Q8WUU4 475 aaPredicted RBP11.64□□□□□ -0.55
H3F3B-204ENST00000586607 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.64□□□□□ -0.55
H3F3B-204ENST00000586607 ARHGEF10LQ9HCE6 1279 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 EMILIN3Q9NT22 766 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 CTNNA3Q9UI47 895 aa11.64□□□□□ -0.55
H3F3B-204ENST00000586607 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
H3F3B-204ENST00000586607 NOVP48745 357 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 SP3Q02447 781 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 ICA1Q05084 483 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 TREML2Q5T2D2 321 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 COL13A1Q5TAT6 717 aaPredicted RBP11.63□□□□□ -0.55
H3F3B-204ENST00000586607 NEDD1Q8NHV4 660 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 ACER1Q8TDN7 264 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 GTF3C2Q8WUA4 911 aaPredicted RBP11.63□□□□□ -0.55
H3F3B-204ENST00000586607 LPAR1Q92633 364 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 MKL1Q969V6 931 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 FEZ1Q99689 392 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 IL25Q9H293 177 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 NYAP2Q9P242 653 aa11.63□□□□□ -0.55
H3F3B-204ENST00000586607 A0A1W2PRG0 241 aa11.62□□□□□ -0.55
H3F3B-204ENST00000586607 BCRP11274 1271 aa11.62□□□□□ -0.55
H3F3B-204ENST00000586607 OSBPP22059 807 aa11.62□□□□□ -0.55
H3F3B-204ENST00000586607 GCLCP48506 637 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-204ENST00000586607 PKN2Q16513 984 aaKnown RBP11.62□□□□□ -0.55
H3F3B-204ENST00000586607 LBX2Q6XYB7 198 aa11.62□□□□□ -0.55
H3F3B-204ENST00000586607 STAG1Q8WVM7 1258 aa11.62□□□□□ -0.55
H3F3B-204ENST00000586607 ERO1AQ96HE7 468 aa11.62□□□□□ -0.55
H3F3B-204ENST00000586607 RNF41Q9H4P4 317 aaPredicted RBP11.62□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L19D6RCP7 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L20D6RJB6 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 ZNF213O14771 459 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 GNRH1P01148 92 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 CYP2C8P10632 490 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
H3F3B-204ENST00000586607 VCAM1P19320 739 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 USP17L24Q0WX57 530 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 ARHGEF6Q15052 776 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 CTU1Q7Z7A3 348 aaKnown RBP11.61□□□□□ -0.55
H3F3B-204ENST00000586607 ASCC2Q9H1I8 757 aaPredicted RBP11.61□□□□□ -0.55
H3F3B-204ENST00000586607 VCPKMTQ9H867 229 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 TCP11L1Q9NUJ3 509 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 MTMR4Q9NYA4 1195 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
H3F3B-204ENST00000586607 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 MYH8P13535 1937 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 PRDM1O75626 825 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 TSPY3P0CV98 308 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 TSPY8P0CW00 308 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 TFAP4Q01664 338 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 CTDSPL2Q05D32 466 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 DGKZQ13574 1117 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 IMMTQ16891 758 aaKnown RBP11.6□□□□□ -0.55
H3F3B-204ENST00000586607 FAM110CQ1W6H9 321 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 CATSPERGQ6ZRH7 1159 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 MAP4K1Q92918 833 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 CEP95Q96GE4 821 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 ESYT1Q9BSJ8 1104 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 NBPF3Q9H094 633 aa11.6□□□□□ -0.55
H3F3B-204ENST00000586607 U3KPZ7 1027 aaPredicted RBP11.6□□□□□ -0.55
H3F3B-204ENST00000586607 LAMA4Q16363 1823 aa11.59□□□□□ -0.55
H3F3B-204ENST00000586607 TSPY2A6NKD2 308 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms