RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 MNX1P50219 401 aaPredicted RBP16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 SLFNL1Q499Z3 407 aa16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 GPRC5AQ8NFJ5 357 aa16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 U2AF1L4Q8WU68 220 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 HAUS7Q99871 368 aa16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 DOCK3Q8IZD9 2030 aa16.17■□□□□ 0.18
PRKCSH-201ENST00000585325 MPHOSPH10O00566 681 aaKnown RBP16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 MBD4O95243 580 aa16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 USP14P54578 494 aa16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 EVX2Q03828 476 aa16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 GTF3C2Q8WUA4 911 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 C12orf42Q96LP6 360 aa16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 PAGR1Q9BTK6 254 aa16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 TXNRD2Q9NNW7 524 aa16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 DCP1AQ9NPI6 582 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-201ENST00000585325 MYH7P12883 1935 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 SGPL1O95470 568 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 CYP2D6P10635 497 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 GABPAQ06546 454 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 ACER1Q8TDN7 264 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 RBPJLQ9UBG7 517 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 GJD2Q9UKL4 321 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 PLXNB2O15031 1838 aa16.15■□□□□ 0.18
PRKCSH-201ENST00000585325 USP17L15C9J2P7 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L13C9JLJ4 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L11C9JVI0 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L18D6R9N7 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L22D6RA61 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L17D6RBQ6 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L19D6RCP7 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L20D6RJB6 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 PRKAB2O43741 272 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 TFRCP02786 760 aaKnown RBP16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 HMGCRP04035 888 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 ERVK-9P63128 1117 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 ERVK-24P63145 666 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L24Q0WX57 530 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 SEPT2Q15019 361 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 DEFB118Q96PH6 123 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 KIAA1683Q9H0B3 1180 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 STAP2Q9UGK3 403 aa16.14■□□□□ 0.17
PRKCSH-201ENST00000585325 MYH8P13535 1937 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 EVI5O60447 810 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 CHGBP05060 677 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 VCAM1P19320 739 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 CYP2B6P20813 491 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 MAPK4P31152 587 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 GUCY1A2P33402 732 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 Q3C1V9 767 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 ZSCAN25Q6NSZ9 544 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 AMOTL1Q8IY63 956 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 NUDT12Q9BQG2 462 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 CWC22Q9HCG8 908 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 PAK6Q9NQU5 681 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 ATP8A2Q9NTI2 1148 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 ECHDC1Q9NTX5 307 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 SWAP70Q9UH65 585 aa16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 BAZ2AQ9UIF9 1905 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-201ENST00000585325 CATSPERGQ6ZRH7 1159 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 SOCS4Q8WXH5 440 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 DYNLL2Q96FJ2 89 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 DDRGK1Q96HY6 314 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 GPATCH3Q96I76 525 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.12■□□□□ 0.173e-6■■■■□ 19.8
PRKCSH-201ENST00000585325 PORCNQ9H237 461 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 RPAP3Q9H6T3 665 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 DCTPP1Q9H773 170 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 COL6A3P12111 3177 aa16.12■□□□□ 0.17
PRKCSH-201ENST00000585325 TRIM32Q13049 653 aa16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 POTEEQ6S8J3 1075 aa16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 TMEM179Q6ZVK1 233 aa16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 GPR142Q7Z601 462 aa16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 TRIB2Q92519 343 aa16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 HMX1Q9NP08 348 aaPredicted RBP16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
PRKCSH-201ENST00000585325 CYP2D7A0A087X1C5 515 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 CNMDO75829 334 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 CCNA1P78396 465 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 WDR78Q5VTH9 848 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 TSHZ3Q63HK5 1081 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 PLEKHH3Q7Z736 793 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 RPTORQ8N122 1335 aa16.1■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L12C9JPN9 530 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 USP17L21D6R901 530 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 AKR1B1P15121 316 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 ZKSCAN1P17029 563 aaPredicted RBP16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 CAPN2P17655 700 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 RGS2P41220 211 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 C12orf60Q5U649 245 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 TANGO6Q9C0B7 1094 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 ARHGEF10LQ9HCE6 1279 aa16.09■□□□□ 0.17
PRKCSH-201ENST00000585325 SPDYE16A6NNV3 312 aaPredicted RBP16.08■□□□□ 0.16
PRKCSH-201ENST00000585325 SMIM22K7EJ46 135 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms