RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	HMGB1	P09429	215 aa	Known RBP	11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	EVC	P57679	992 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	TFAP4	Q01664	338 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	PPAT	Q06203	517 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	ABCB5	Q2M3G0	1257 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	CYB5R4	Q7L1T6	521 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	DGKH	Q86XP1	1220 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	ZKSCAN4	Q969J2	545 aa	Predicted RBP	11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	NEK1	Q96PY6	1258 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	C22orf23	Q9BZE7	217 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	KANSL2	Q9H9L4	492 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	MKNK2	Q9HBH9	465 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	CREBZF	Q9NS37	354 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	MTMR4	Q9NYA4	1195 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	NYAP2	Q9P242	653 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	KCNH4	Q9UQ05	1017 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054	AFG3L2	Q9Y4W6	797 aa		11.79	□□□□□ -0.52
EIF4A1-231	ENST00000584054		B4E1Z4	1266 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	KDM4A	O75164	1064 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	GH2	P01242	217 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	MCC	P23508	829 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	SH3D19	Q5HYK7	790 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	DHX32	Q7L7V1	743 aa	Known RBP	11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	ERO1B	Q86YB8	467 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	CLMN	Q96JQ2	1002 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054	DOCK1	Q14185	1865 aa		11.78	□□□□□ -0.52
EIF4A1-231	ENST00000584054		A0A1W2PRG0	241 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TESPA1	A2RU30	521 aa	Predicted RBP	11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	USP17L5	A8MUK1	530 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	FAM155A	B1AL88	458 aa	Predicted RBP	11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CXCL11	O14625	94 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PSMA5	P28066	241 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GJA5	P36382	358 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	LIFR	P42702	1097 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PPIL2	Q13356	520 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	MOGS	Q13724	837 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SEPT2	Q15019	361 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CCDC178	Q5BJE1	867 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	FAM47A	Q5JRC9	791 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PPP4R3B	Q5MIZ7	849 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SGMS1	Q86VZ5	419 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CEP95	Q96GE4	821 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	C12orf42	Q96LP6	360 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TMX2	Q9Y320	296 aa		11.77	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RANBP6	O60518	1105 aa	Known RBP	11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GDF11	O95390	407 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TSPY3	P0CV98	308 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TSPY8	P0CW00	308 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ZBTB48	P10074	688 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RPS6KB1	P23443	525 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	MCM5	P33992	734 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TRDN	Q13061	729 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RUFY3	Q7L099	469 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ENAH	Q8N8S7	591 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	MS4A4A	Q96JQ5	239 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TMEM87B	Q96K49	555 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TRIM34	Q9BYJ4	488 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	KIAA1683	Q9H0B3	1180 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CABP5	Q9NP86	173 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CSAD	Q9Y600	493 aa		11.76	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ATAD5	Q96QE3	1844 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TSPY2	A6NKD2	308 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SH2B2	O14492	632 aa	Predicted RBP	11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	NMT2	O60551	498 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TTLL1	O95922	423 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SLC10A3	P09131	477 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SNHG28	P0DPA3	235 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	BACE1	P56817	501 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	HUNK	P57058	714 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	C1QTNF8	P60827	252 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PRKG1	Q13976	671 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SPRYD7	Q5W111	196 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RGMB	Q6NW40	437 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RASAL3	Q86YV0	1011 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	HOMEZ	Q8IX15	550 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ZNF280C	Q8ND82	737 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	WNK4	Q96J92	1243 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	JAKMIP1	Q96N16	626 aa	Known RBP	11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	LY9	Q9HBG7	655 aa		11.75	□□□□□ -0.53
EIF4A1-231	ENST00000584054	MYH8	P13535	1937 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054		A0A0G2JLL6	359 aa	Predicted RBP	11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	C19orf81	C9J6K1	198 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	IRF6	O14896	467 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PRC1	O43663	620 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	EEF2	P13639	858 aa	Known RBP	11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RCAN1	P53805	252 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GSE1	Q14687	1217 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	BLOC1S2	Q6QNY1	142 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	RALYL	Q86SE5	291 aa	Known RBP	11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	IQCA1	Q86XH1	822 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	STK11IP	Q8N1F8	1099 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	TMTC2	Q8N394	836 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	GMCL1P1	Q8NEA9	526 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	ACER1	Q8TDN7	264 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	CCDC102A	Q96A19	550 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	SLC10A4	Q96EP9	437 aa		11.74	□□□□□ -0.53
EIF4A1-231	ENST00000584054	MAP3K14	Q99558	947 aa		11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms