RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 DCP1AQ9NPI6 582 aaPredicted RBP29.84■■■□□ 2.37
TSEN54-209ENST00000583454 ATP8A2Q9NTI2 1148 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 TRIOBPQ9H2D6 2365 aa29.84■■■□□ 2.37
TSEN54-209ENST00000583454 NAV1Q8NEY1 1877 aa29.83■■■□□ 2.37
TSEN54-209ENST00000583454 GDF11O95390 407 aa29.83■■■□□ 2.37
TSEN54-209ENST00000583454 GCLCP48506 637 aaPredicted RBP29.83■■■□□ 2.37
TSEN54-209ENST00000583454 BACE1P56817 501 aa29.83■■■□□ 2.37
TSEN54-209ENST00000583454 NKX2-3Q8TAU0 364 aa29.83■■■□□ 2.37
TSEN54-209ENST00000583454 BIN2Q9UBW5 565 aaPredicted RBP29.83■■■□□ 2.37
TSEN54-209ENST00000583454 ZBTB21Q9ULJ3 1066 aa29.83■■■□□ 2.37
TSEN54-209ENST00000583454 INHAP05111 366 aa29.82■■■□□ 2.36
TSEN54-209ENST00000583454 HLA-DOAP06340 250 aa29.82■■■□□ 2.36
TSEN54-209ENST00000583454 PABPC4Q13310 644 aaKnown RBP eCLIP29.82■■■□□ 2.36
TSEN54-209ENST00000583454 TTC6Q86TZ1 520 aa29.81■■■□□ 2.36
TSEN54-209ENST00000583454 CRACR2BQ8N4Y2 399 aaPredicted RBP29.81■■■□□ 2.36
TSEN54-209ENST00000583454 EHD4Q9H223 541 aa29.81■■■□□ 2.36
TSEN54-209ENST00000583454 GINM1Q9NU53 330 aa29.81■■■□□ 2.36
TSEN54-209ENST00000583454 MCM9Q9NXL9 1143 aa29.81■■■□□ 2.36
TSEN54-209ENST00000583454 MORF4L1Q9UBU8 362 aa29.81■■■□□ 2.36
TSEN54-209ENST00000583454 TRIM6-TRIM34B2RNG4 842 aa29.8■■■□□ 2.36
TSEN54-209ENST00000583454 M0R2C6 588 aa29.8■■■□□ 2.36
TSEN54-209ENST00000583454 HOXA7P31268 230 aaPredicted RBP29.8■■■□□ 2.36
TSEN54-209ENST00000583454 U2AF1L4Q8WU68 220 aaKnown RBP29.8■■■□□ 2.36
TSEN54-209ENST00000583454 PCDH10Q9P2E7 1040 aa29.8■■■□□ 2.36
TSEN54-209ENST00000583454 SLC4A4Q9Y6R1 1079 aa29.8■■■□□ 2.36
TSEN54-209ENST00000583454 BAZ2AQ9UIF9 1905 aaKnown RBP29.79■■■□□ 2.36
TSEN54-209ENST00000583454 GPAA1O43292 621 aa29.79■■■□□ 2.36
TSEN54-209ENST00000583454 COA7Q96BR5 231 aa29.79■■■□□ 2.36
TSEN54-209ENST00000583454 SEC62Q99442 399 aaKnown RBP29.79■■■□□ 2.36
TSEN54-209ENST00000583454 GJD2Q9UKL4 321 aa29.79■■■□□ 2.36
TSEN54-209ENST00000583454 H0YGN5 161 aa29.78■■■□□ 2.36
TSEN54-209ENST00000583454 POLR3DP05423 398 aaPredicted RBP29.78■■■□□ 2.36
TSEN54-209ENST00000583454 PLCD1P51178 756 aa29.78■■■□□ 2.36
TSEN54-209ENST00000583454 TATDN1Q6P1N9 297 aa29.78■■■□□ 2.36
TSEN54-209ENST00000583454 RILPL2Q969X0 211 aa29.78■■■□□ 2.36
TSEN54-209ENST00000583454 ALPK3Q96L96 1907 aa29.78■■■□□ 2.36
TSEN54-209ENST00000583454 SZT2Q5T011 3432 aa29.78■■■□□ 2.36
TSEN54-209ENST00000583454 GSG1L2A8MUP6 293 aa29.77■■■□□ 2.36
TSEN54-209ENST00000583454 SGPL1O95470 568 aa29.77■■■□□ 2.36
TSEN54-209ENST00000583454 ERICH6BQ5W0A0 696 aa29.77■■■□□ 2.36
TSEN54-209ENST00000583454 CCDC136Q96JN2 1154 aa29.77■■■□□ 2.36
TSEN54-209ENST00000583454 P2RX7Q99572 595 aaKnown RBP29.77■■■□□ 2.36
TSEN54-209ENST00000583454 PAK6Q9NQU5 681 aaPredicted RBP29.77■■■□□ 2.36
TSEN54-209ENST00000583454 SERPINB13Q9UIV8 391 aa29.77■■■□□ 2.36
TSEN54-209ENST00000583454 C19orf81C9J6K1 198 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 USP17L10C9JJH3 530 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 PEX10O60683 326 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 GNAT2P19087 354 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 TTC22Q5TAA0 569 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 GIMAP6Q6P9H5 292 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 POTEEQ6S8J3 1075 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 TRIM34Q9BYJ4 488 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 TXNRD2Q9NNW7 524 aa29.76■■■□□ 2.35
TSEN54-209ENST00000583454 COLQQ9Y215 455 aaPredicted RBP29.76■■■□□ 2.35
TSEN54-209ENST00000583454 HELLSQ9NRZ9 838 aa29.75■■■□□ 2.35
TSEN54-209ENST00000583454 EMILIN3Q9NT22 766 aa29.75■■■□□ 2.35
TSEN54-209ENST00000583454 TMOD4Q9NZQ9 345 aa29.75■■■□□ 2.35
TSEN54-209ENST00000583454 GH2P01242 217 aa29.74■■■□□ 2.35
TSEN54-209ENST00000583454 HERVK_113P62684 666 aa29.74■■■□□ 2.35
TSEN54-209ENST00000583454 IRX3P78415 501 aaPredicted RBP29.74■■■□□ 2.35
TSEN54-209ENST00000583454 GABPAQ06546 454 aa29.74■■■□□ 2.35
TSEN54-209ENST00000583454 DDRGK1Q96HY6 314 aa29.74■■■□□ 2.35
TSEN54-209ENST00000583454 TAOK2Q9UL54 1235 aa29.74■■■□□ 2.35
TSEN54-209ENST00000583454 PATL2C9JE40 543 aaKnown RBP29.73■■■□□ 2.35
TSEN54-209ENST00000583454 USP17L12C9JPN9 530 aa29.73■■■□□ 2.35
TSEN54-209ENST00000583454 USP17L21D6R901 530 aa29.73■■■□□ 2.35
TSEN54-209ENST00000583454 FARP2O94887 1054 aaPredicted RBP29.73■■■□□ 2.35
TSEN54-209ENST00000583454 CYP2D6P10635 497 aa29.73■■■□□ 2.35
TSEN54-209ENST00000583454 GSPT1P15170 499 aaKnown RBP29.73■■■□□ 2.35
TSEN54-209ENST00000583454 SDSP20132 328 aa29.73■■■□□ 2.35
TSEN54-209ENST00000583454 EVX2Q03828 476 aa29.73■■■□□ 2.35
TSEN54-209ENST00000583454 C12orf60Q5U649 245 aa29.73■■■□□ 2.35
TSEN54-209ENST00000583454 CRISPLD2Q9H0B8 497 aa29.73■■■□□ 2.35
TSEN54-209ENST00000583454 FAM227BQ96M60 508 aa29.72■■■□□ 2.35
TSEN54-209ENST00000583454 DEFB118Q96PH6 123 aa29.72■■■□□ 2.35
TSEN54-209ENST00000583454 RBPJLQ9UBG7 517 aa29.72■■■□□ 2.35
TSEN54-209ENST00000583454 FXR1P51114 621 aaKnown RBP eCLIP29.71■■■□□ 2.35
TSEN54-209ENST00000583454 SBK1Q52WX2 424 aa29.71■■■□□ 2.35
TSEN54-209ENST00000583454 CTR9Q6PD62 1173 aa29.71■■■□□ 2.35
TSEN54-209ENST00000583454 C12orf42Q96LP6 360 aa29.71■■■□□ 2.35
TSEN54-209ENST00000583454 EPB41L4AQ9HCS5 686 aaPredicted RBP29.71■■■□□ 2.35
TSEN54-209ENST00000583454 A0A0D9SFI3 127 aa29.7■■■□□ 2.35
TSEN54-209ENST00000583454 SHMT1P34896 483 aa29.7■■■□□ 2.35
TSEN54-209ENST00000583454 TRIM32Q13049 653 aa29.7■■■□□ 2.35
TSEN54-209ENST00000583454 NMIQ13287 307 aaPredicted RBP29.7■■■□□ 2.35
TSEN54-209ENST00000583454 MCMDC2Q4G0Z9 681 aa29.7■■■□□ 2.35
TSEN54-209ENST00000583454 CCDC129Q6ZRS4 1044 aa29.7■■■□□ 2.35
TSEN54-209ENST00000583454 MYH8P13535 1937 aa29.7■■■□□ 2.34
TSEN54-209ENST00000583454 CYP2D7A0A087X1C5 515 aa29.69■■■□□ 2.34
TSEN54-209ENST00000583454 HMGCRP04035 888 aa29.69■■■□□ 2.34
TSEN54-209ENST00000583454 USP17L2Q6R6M4 530 aa29.69■■■□□ 2.34
TSEN54-209ENST00000583454 AMOTL1Q8IY63 956 aa29.69■■■□□ 2.34
TSEN54-209ENST00000583454 IFNL3Q8IZI9 196 aa29.69■■■□□ 2.34
TSEN54-209ENST00000583454 DPF3Q92784 378 aa29.69■■■□□ 2.34
TSEN54-209ENST00000583454 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.69■■■□□ 2.346e-7■■■■■ 39.8
TSEN54-209ENST00000583454 ARPP21Q9UBL0 812 aaPredicted RBP29.69■■■□□ 2.34
TSEN54-209ENST00000583454 Q3C1V9 767 aa29.68■■■□□ 2.34
TSEN54-209ENST00000583454 GPRC5AQ8NFJ5 357 aa29.68■■■□□ 2.34
TSEN54-209ENST00000583454 SWAP70Q9UH65 585 aa29.68■■■□□ 2.34
TSEN54-209ENST00000583454 SMIM22K7EJ46 135 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms