RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 FAM47AQ5JRC9 791 aa23.71■■□□□ 1.39
TOP3A-213ENST00000582230 PPP4R3BQ5MIZ7 849 aa23.71■■□□□ 1.39
TOP3A-213ENST00000582230 CREB3L3Q68CJ9 461 aa23.71■■□□□ 1.39
TOP3A-213ENST00000582230 A0A0G2JLL6 359 aaPredicted RBP23.7■■□□□ 1.38
TOP3A-213ENST00000582230 C19orf81C9J6K1 198 aa23.7■■□□□ 1.38
TOP3A-213ENST00000582230 USP17L10C9JJH3 530 aa23.7■■□□□ 1.38
TOP3A-213ENST00000582230 BACE1P56817 501 aa23.7■■□□□ 1.38
TOP3A-213ENST00000582230 ICA1Q05084 483 aa23.7■■□□□ 1.38
TOP3A-213ENST00000582230 TRDNQ13061 729 aa23.7■■□□□ 1.38
TOP3A-213ENST00000582230 FASTKD5Q7L8L6 764 aaKnown RBP23.7■■□□□ 1.38
TOP3A-213ENST00000582230 PRRT2Q7Z6L0 340 aaPredicted RBP23.7■■□□□ 1.38
TOP3A-213ENST00000582230 ARHGEF10LQ9HCE6 1279 aa23.7■■□□□ 1.38
TOP3A-213ENST00000582230 NEDD4P46934 1319 aa23.69■■□□□ 1.38
TOP3A-213ENST00000582230 CCL15-CCL14A0A0B4J2E2 113 aa23.69■■□□□ 1.38
TOP3A-213ENST00000582230 IGKV6D-41A0A0C4DH26 115 aa23.69■■□□□ 1.38
TOP3A-213ENST00000582230 MAP2K1Q02750 393 aaPredicted RBP23.69■■□□□ 1.38
TOP3A-213ENST00000582230 CCL15Q16663 113 aa23.69■■□□□ 1.38
TOP3A-213ENST00000582230 SH3D19Q5HYK7 790 aa23.69■■□□□ 1.38
TOP3A-213ENST00000582230 KIAA1683Q9H0B3 1180 aa23.69■■□□□ 1.38
TOP3A-213ENST00000582230 SH2D4AQ9H788 454 aa23.69■■□□□ 1.38
TOP3A-213ENST00000582230 E7EWF7 191 aa23.68■■□□□ 1.38
TOP3A-213ENST00000582230 ZKSCAN1P17029 563 aaPredicted RBP23.68■■□□□ 1.38
TOP3A-213ENST00000582230 JMYQ8N9B5 988 aa23.68■■□□□ 1.38
TOP3A-213ENST00000582230 FEZ1Q99689 392 aa23.68■■□□□ 1.38
TOP3A-213ENST00000582230 TCP11L1Q9NUJ3 509 aa23.68■■□□□ 1.38
TOP3A-213ENST00000582230 MTMR4Q9NYA4 1195 aa23.68■■□□□ 1.38
TOP3A-213ENST00000582230 NYAP2Q9P242 653 aa23.68■■□□□ 1.38
TOP3A-213ENST00000582230 THSD7BQ9C0I4 1608 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 EEF2P13639 858 aaKnown RBP23.67■■□□□ 1.38
TOP3A-213ENST00000582230 USP14P54578 494 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 MTMR2Q13614 643 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 OTUD7BQ6GQQ9 843 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 RALYLQ86SE5 291 aaKnown RBP23.67■■□□□ 1.38
TOP3A-213ENST00000582230 SIAH1Q8IUQ4 282 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 ACER1Q8TDN7 264 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 BRI3BPQ8WY22 251 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 CEP95Q96GE4 821 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 USP26Q9BXU7 913 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 TMOD4Q9NZQ9 345 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 LAMA4Q16363 1823 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 ATAD5Q96QE3 1844 aa23.67■■□□□ 1.38
TOP3A-213ENST00000582230 B4E1Z4 1266 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 KDM4AO75164 1064 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 TTLL1O95922 423 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 HSPA4P34932 840 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 TSGA10IPQ3SY00 556 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 CCDC178Q5BJE1 867 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 USP17L2Q6R6M4 530 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 IFNL1Q8IU54 200 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 CLEC10AQ8IUN9 316 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 PROCA1Q8NCQ7 364 aaPredicted RBP23.66■■□□□ 1.38
TOP3A-213ENST00000582230 NCOA7Q8NI08 942 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 ZSWIM5Q9P217 1185 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 SYNPO2Q9UMS6 1093 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 TMX2Q9Y320 296 aa23.66■■□□□ 1.38
TOP3A-213ENST00000582230 A0A1W2PRG0 241 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 HMGCS2P54868 508 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 ATP2B2Q01814 1243 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 MOGSQ13724 837 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 C8orf34Q49A92 452 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 IQCA1Q86XH1 822 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 PTPN18Q99952 460 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 ZCCHC17Q9NP64 241 aaKnown RBP23.65■■□□□ 1.38
TOP3A-213ENST00000582230 IL17RBQ9NRM6 502 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 CLIP2Q9UDT6 1046 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 TAF6LQ9Y6J9 622 aa23.65■■□□□ 1.38
TOP3A-213ENST00000582230 ALDH1A1P00352 501 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 MCCP23508 829 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 KRT32Q14532 448 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 GADL1Q6ZQY3 521 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 STOX1Q6ZVD7 989 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 ANKRD23Q86SG2 305 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 KCNB2Q92953 911 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 MKL1Q969V6 931 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 C12orf42Q96LP6 360 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 TTC14Q96N46 770 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 MYH8P13535 1937 aa23.64■■□□□ 1.37
TOP3A-213ENST00000582230 NOVP48745 357 aa23.63■■□□□ 1.37
TOP3A-213ENST00000582230 BEGAINQ9BUH8 593 aa23.63■■□□□ 1.37
TOP3A-213ENST00000582230 EMILIN3Q9NT22 766 aa23.63■■□□□ 1.37
TOP3A-213ENST00000582230 PHIPQ8WWQ0 1821 aa23.63■■□□□ 1.37
TOP3A-213ENST00000582230 BTBD19C9JJ37 291 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 IGF2BP3O00425 579 aaKnown RBP eCLIP23.62■■□□□ 1.37
TOP3A-213ENST00000582230 NMT2O60551 498 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 ZYXQ15942 572 aaKnown RBP23.62■■□□□ 1.37
TOP3A-213ENST00000582230 GPAT2Q6NUI2 795 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 LPAR1Q92633 364 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 GOPCQ9HD26 462 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 STX8Q9UNK0 236 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 AGTPBP1Q9UPW5 1226 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 SLC45A1Q9Y2W3 748 aa23.62■■□□□ 1.37
TOP3A-213ENST00000582230 GREB1LQ9C091 1923 aaPredicted RBP23.61■■□□□ 1.37
TOP3A-213ENST00000582230 CA12O43570 354 aa23.61■■□□□ 1.37
TOP3A-213ENST00000582230 PABPC4Q13310 644 aaKnown RBP eCLIP23.61■■□□□ 1.37
TOP3A-213ENST00000582230 DGKHQ86XP1 1220 aa23.61■■□□□ 1.37
TOP3A-213ENST00000582230 RASEFQ8IZ41 740 aa23.61■■□□□ 1.37
TOP3A-213ENST00000582230 FAM43AQ8N2R8 423 aa23.61■■□□□ 1.37
TOP3A-213ENST00000582230 NKX2-3Q8TAU0 364 aa23.61■■□□□ 1.37
TOP3A-213ENST00000582230 ZSCAN10Q96SZ4 725 aaPredicted RBP23.61■■□□□ 1.37
TOP3A-213ENST00000582230 UBAC1Q9BSL1 405 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms